Papers by Yuan Ye
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| Challenge: | Chain-of-Thought prompting is a de facto method to elicit reasoning capabilities from large language models (LLMs). |
| Approach: | They propose a step-aware formal verification framework Safe to address hallucinations in CoT prompting . they propose 'formal step' as a benchmark for step correctness theorem proving with 30,809 formal statements. |
| Outcome: | The proposed framework shows significant performance improvement while offering interpretable and verifiable evidence. |
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| Challenge: | Existing top-k attention methods struggle to strike a balance between efficiency and accuracy. |
| Approach: | They propose a top-k attention approach that integrates low-overhead techniques into the Top-k Attention process to achieve 7.2 speedup compared to vanilla full attention. |
| Outcome: | The proposed approach achieves 7.2 speedup compared to current top-k attention methods while maintaining model accuracy. |
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| Challenge: | Large Language Models exhibit a significant performance gap in Information Extraction (IE) high-quality instruction data is the vital key for enhancing LLMs' specific capabilities . |
| Approach: | They propose a bilingual (English and Chinese) IE instruction corpus that contains 0.32B tokens. |
| Outcome: | The proposed model improves the performance of LLMs for IE with zero-shot generalization. |
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| Challenge: | a number of tools are used to perform complex tasks, but the tool utilization process can cause errors. |
| Approach: | They propose a critique evaluation benchmark for tool learning that analyzes function-calling errors on tool evaluation benchmarks. |
| Outcome: | The proposed critique evaluation benchmark holds diverse tool-use errors with varying complexities, which better reflects real-world scenarios. |
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| Challenge: | Biology-Instructions is the first large-scale instruction-tuning dataset for multi-omics biological sequences. |
| Approach: | They propose a large-scale instruction-tuning dataset for multi-omics biological sequences . they propose 'chatMultiOmics' to overcome limitations of current LLMs on multi-ome tasks . |
| Outcome: | The proposed dataset bridges LLMs and complex biological sequence-related tasks while maintaining conversational fluency. |
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| Challenge: | Illicit drug use among teens and young adults remains a public health concern . existing models ignore latent and interconnected structures among survey variables . |
| Approach: | They propose a joint graph-language modeling framework to detect illicit drug use among TYAs . they use large-scale surveys such as the Youth Risk Behavior Survey and the National Survey on Drug Use and Health to analyze data . |
| Outcome: | The proposed framework outperforms baseline models on YRBS and NSDUH datasets in predictive accuracy. |
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| Challenge: | Existing approaches for personalizing large language models require modifying parameters. |
| Approach: | They propose a lightweight approach to personalizing large language models via retrieval augmentation . relevance serves as an unreliable proxy for utility, they argue . |
| Outcome: | The proposed framework outperforms strong heuristic and retrieval-augmented baselines on nine personalization tasks. |
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| Challenge: | Using leaderboards, researchers can track the performance of various systems on various NLP tasks. |
| Approach: | They propose a new conceptualization and implementation of NLP evaluation using a leaderboard. |
| Outcome: | The ExplainaBoard is an evaluation tool for natural language processing (NLP) it covers more than 400 systems, 50 datasets, 40 languages, and 12 tasks. |
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| Challenge: | Existing methods for query-focused table summarization struggle with complex reasoning and token-limit issues. |
| Approach: | They propose a Fast, Accurate, and Privacy-Compliant table summarization approach via Offline Template Generation. |
| Outcome: | The proposed method outperforms baseline methods on widely-used benchmarks. |
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| Challenge: | Existing language models that use discrete representations for unified processing of various modalities are limited to text generation and do not include multimodal output. |
| Approach: | They propose a multimodal language model that utilizes discrete representations for unified processing of various modalities. |
| Outcome: | The proposed model can be trained stably without any alterations to existing models or training paradigms. |
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| Challenge: | Existing approaches to agent routing emphasize cost efficiency while overlooking the fine-grained contextual and relational structure inherent in QA tasks. |
| Approach: | They propose a framework that formulates multi-agent QA as a knowledge-graph-guided routing problem supervised by empirical performance signals. |
| Outcome: | The proposed framework outperforms single-agent and ensemble baselines while generalizing across benchmarks and LLM backbones. |
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| Challenge: | Existing methods for text-to-image synthesis lack systematic error analysis and refinement strategies, resulting in limited reliability and effectiveness. |
| Approach: | They propose a plug-and-play multi-agent system called GenPilot that integrates error analysis, clustering-based adaptive exploration, fine-grained verification and a memory module for iterative optimization. |
| Outcome: | The proposed method improves text consistency and structural coherence on images with a plug-and-play system. |
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| Challenge: | Multimodal Large Language Models (MLLMs) show impressive capabilities across visual–language tasks, but their capacity to evaluate artistic expression remains limited. |
| Approach: | They propose an attribute-specific multi-LoRA approach where each attribute corresponds to a distinct evaluation dimension in the scoring rubric. |
| Outcome: | The proposed approach increases correlation from 0.468 to 0.653 on Qwen2.5-VL-7B, with the largest gains on perceptual dimensions and narrowed gaps on higher-order attributes. |
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| Challenge: | Chain-of-Thought prompting improves the math reasoning capability of large language models. |
| Approach: | They propose a method for attribution of component-level contributions in CoT reasoning using Shapley value and a stratified sampling algorithm that significantly reduces computational complexity. |
| Outcome: | The proposed method reduces computational complexity and provides robust correlations with model performance. |
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| Challenge: | Existing approaches to visual-language understanding lack unified tokenization for images and videos . lack of unified visual representations makes it difficult to learn multi-modal interactions from poor projection layers. |
| Approach: | They propose to unify visual representation into the language feature space to advance the foundational LLM towards a unified LVLM. |
| Outcome: | The proposed model outperforms Video-ChatGPT on image benchmarks and on 9 image benchmark benchmarks. |
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| Challenge: | Document-level relation extraction (RE) is more challenging than sentence RE as it often requires reasoning over multiple sentences. |
| Approach: | They propose a method to heuristically select evidence sentences for document-level relation extraction. |
| Outcome: | The proposed method can be easily combined with BiLSTM to achieve good performance on benchmark datasets even better than fancy graph neural network based methods. |
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| Challenge: | RNA-binding proteins play key roles in post-transcriptional gene regulation . existing methods focus on shallow sequence features or coarse structural representations . large language models allow for precise modeling and biologically informed de novo RNA design . |
| Approach: | They extend RPI15223 into a multi-resolution, structure-level RBP-RNA dataset and introduce RBPtool, a framework that fuses sequence and structural information. |
| Outcome: | The proposed framework achieves state-of-the-art performance on public benchmarks and the RPI15223 dataset while supporting fine-grained level predictions. |
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| Challenge: | OpenNRE provides a framework to implement neural relation extraction (RE) . the toolkit provides various functional modules based on TensorFlow and PyTorch . |
| Approach: | OpenNRE is an open-source framework to implement neural relation extraction models. they also release an online system to meet real-time extraction without any training and deployment. |
| Outcome: | OpenNRE provides a framework to implement neural models for relation extraction (RE) the toolkit also includes an online system to meet real-time extraction without training and deployment . |
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| Challenge: | Using Sequence-to-Sequence models for dialogue state tracking remains an understudied topic. |
| Approach: | They propose to use a pre-training objective and a dialogue context representation to investigate this problem. |
| Outcome: | The proposed model is more effective than auto-regressive language modeling, the authors show . the proposed model may have a hard time recovering from earlier mistakes, they say . |
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| Challenge: | Existing research on LLM biases has focused on direct questioning or general-purpose settings . pronounced behavioral biase despite their growing deployment in financial analysis, forecasting, and decision support. |
| Approach: | They propose a benchmark to evaluate behavioral biases of large language models in MFMD . they use a multilingual financial misinformation dataset to integrate these with misinformation claims . |
| Outcome: | The proposed benchmark evaluates behavioral biases of large language models across economic scenarios. |
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| Challenge: | Pretrained language models (LMs) are a powerful transfer learning approach for knowledge graph (KG) completion. |
| Approach: | They propose a parameter-lite transfer learning approach for pretrained language models for knowledge graph (KG) completion. |
| Outcome: | The proposed model outperforms the state-of-the-art models on a knowledge graph completion benchmark by tuning 1% of the parameters. |
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| Challenge: | Large visionlanguage models (LVLMs) are a powerful visual-language reasoning tool. |
| Approach: | They propose to integrate attention analysis with LLaVA-CAM to determine interactions between visual representations. |
| Outcome: | The proposed approach can be used to determine interactions between visual representations. |
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| Challenge: | Automated theorem proving (ATP) benchmarks focus on symbolic inference but rarely involve understanding complex number combination reasoning. |
| Approach: | They propose a benchmark that requires a model to reduce a trigonometric expression with step-by-step proof and evaluates a generative LM’s reasoning ability on formulas and ability to manipulate, group, and factor number terms. |
| Outcome: | The proposed benchmark evaluates a generative LM’s reasoning ability on formulas and ability to manipulate, group, and factor number terms. |
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| Challenge: | Existing methods for video-text retrieval capture fine-grained semantic concepts . however, they lack the ability to capture finer-grain concepts such as objects and actions. |
| Approach: | They propose a dual-encoder architecture for fast video-text retrieval that learns lexicon representations to capture fine-grained semantics. |
| Outcome: | The proposed framework outperforms existing methods with 4.8% and 8.2% improvement on MSR-VTT and DiDeMo respectively. |
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| Challenge: | Existing models lack accurate modeling of cognitive empathy, especially the ability to understand users’ emotions and their underlying psychological causes. |
| Approach: | They propose a model tailored for the Chinese cultural context that integrates cognitive empathy into LLMs. |
| Outcome: | The proposed model outperforms existing models in key evaluation metrics, particularly in empathy, comprehensibility, and professionalism. |
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| Challenge: | Existing methods for vision-language pre-training lack high-level semantics and text is not sufficiently involved in masked modeling. |
| Approach: | They propose a semantics-enhanced cross-modal MIM framework for vision-language representation learning that harvests high-level semantics from global image features via self-supervised agreement learning and transfers them to local patch encodings by sharing the encode space. |
| Outcome: | The proposed model achieves state-of-the-art or competitive performance on multiple vision-language tasks. |
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| Challenge: | Language Models (LMs) play a pivotal role in extracting structured information from unstructured text. |
| Approach: | They propose to reformulate the task to be entity-centric, enabling the use of diverse metrics that can provide more insights from various perspectives. |
| Outcome: | The proposed model outperforms baselines and human evaluations on the extracted entities. |
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| Challenge: | Existing approaches to cluster graphs with GNNs are limited due to label scarcity. |
| Approach: | They propose to leverage large language models to enhance text-attributed graph clustering by using three LLMs as ranking-based supervision signals. |
| Outcome: | The proposed approach generates reliable guidance using collaboration of three LLM-based agents as ranking-based supervision signals. |
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| Challenge: | Accurate assessment of critical thinking is limited by the Intention Behavior Gap in psychology . evaluators that measure self-reported competence are limited by multiagent architectures . |
| Approach: | They propose a framework that operationalizes cognitive assessment into an interpretable multi-agent workflow with Assessment Chain-of-Thought. |
| Outcome: | The proposed framework aligns better with human expert ratings than gold-standard inventories on large-scale simulations and human participants. |
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| Challenge: | Existing evaluations of large language models fail to reflect fine-grained capabilities . existing benchmarks are manually curated or domain-generic, limiting scalability and alignment with real use cases. |
| Approach: | They propose a framework that allows custom construction of benchmarks from large-scale scientific data to evaluate application-specific scientific capabilities in LLMs. |
| Outcome: | The proposed framework reveals fine-grained differences in scientific capabilities that standard benchmarks overlook . it allows custom construction of benchmarks from large-scale scientific data to evaluate application-specific capabilities in LLMs. |
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| Challenge: | Large Language Models (LLMs) can simulate non-native-like English use observed in human second language (L2) learners interfered with by their native first language (N1) knowledge. |
| Approach: | They use large language models to simulate non-native-like English use observed in human second language (L2) learners, and then compare their outputs to real L2 learner data. |
| Outcome: | The proposed models replicate L1-dependent patterns observed in human second language (L2) learners, with distinct influences from various languages. |
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| Challenge: | Existing role-playing models rely on superficial textual descriptions or simplistic metrics, inadequately modeling both intrinsic and extrinsic character dimensions. |
| Approach: | They propose a framework that integrates fine-grained psychological attributes and explicit memory control for role-playing. |
| Outcome: | The proposed framework outperforms baseline models in human-likeness and character fidelity. |
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| Challenge: | Existing approaches to discourse parsing focus on studying the semantic and syntactic aspects of EDU pairs, but they do not address long span dependencies. |
| Approach: | They propose a new transition-based discourse parser that takes discourse cohesion into account by using memory networks. |
| Outcome: | The proposed method outperforms traditional features and improves performance on the RST discourse treebank. |
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| Challenge: | Recent advances in neural theorem-proving resort to large language models and tree searches. |
| Approach: | They propose a Dynamic-Tree Driven Theorem Solver to accommodate general theoremes by guiding the search procedure with state confidence and proof-level values. |
| Outcome: | The proposed method outperforms state-of-the-art methods on two popular theorem-proving datasets with a 6.65% improvement on average in terms of success rate. |
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| Challenge: | Existing methods to extract procedural knowledge from documents focus on text-only settings, which is insufficient for entity disambiguation. |
| Approach: | They propose a model to detect the entity and the corresponding bounding box groundings in images. |
| Outcome: | The proposed model detects the entity and the corresponding bounding box groundings in image (i.e., visual entities) it is based on a dataset of a WikiHow 1 and EHow 2 document and the results are compared with existing models. |
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| Challenge: | Existing pipelines generate long reasoning data from more capable Large Language Models (LLMs) and apply manually heuristic or naturalness-based selection methods to filter high-quality samples. |
| Approach: | They propose to use supervised fine-tuning to generate long reasoning data from more capable Large Language Models and apply manually heuristic or naturalness-based selection methods to filter high-quality samples. |
| Outcome: | Experiments on four LLMs and five evaluation benchmarks show that the proposed approach is effective in mitigating step length confounding problem. |
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| Challenge: | Large Language Models (LLMs) are increasingly integrated into real-world decision-making, but their ability to comprehend and reason about policy-related content remains underexplored. |
| Approach: | They propose a bilingual benchmark evaluating policy comprehension comprising 21K cases across a broad spectrum of policy areas. |
| Outcome: | The proposed model shows stronger performance on application-oriented policy tasks than on memorization or conceptual understanding, and yields the highest accuracy on structured reasoning tasks. |
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| Challenge: | Existing studies on large language models focus on literal-level translation quality, such as adequacy and fluency. |
| Approach: | They propose a Culture-Aware Novel-Driven Parallel Dataset for Machine Translation and a multi-dimensional evaluation framework for assessing cultural translation quality. |
| Outcome: | The proposed model improves evaluation reliability in LLM-as-a-judge scenarios under culture-aware constraints. |
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| Challenge: | Prior work has focused on the ability of Large Language Models to **identify** or **classify** fallacies, but their robustness against these fallacias in persuasive contexts remains largely unexplored. |
| Approach: | They propose a new metric to assess LLM robustness against fallacies by pairing factual questions with fallacious arguments and developing a multi-round debate framework to assess model resilience. |
| Outcome: | The proposed metric disentangles robustness from a model’s knowledge limitations and demonstrates unique vulnerability profiles across models. |
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| Challenge: | Existing methods for nutrition question answering face limited reasoning capacity and contextual overload . poor dietary patterns are associated with more than 11 million deaths in 2017 . |
| Approach: | They propose a framework that enables supervised multi-agent collaboration for nutritional QA. |
| Outcome: | The proposed framework outperforms single-agent and ensemble baselines in multi-agency reasoning tasks. |
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| Challenge: | Existing methods for domain-specific reasoning with large language models require updating parameter updates. |
| Approach: | They propose a plug-and-play intervention framework that adaptively steers LLM reasoning in activation space. |
| Outcome: | The proposed framework achieves zero-shot accuracy improvements of 3.4–6.5% over the base model while outperforming chain-of-thought-style reasoning with 2–3 higher token efficiency and robust accuracy gains. |
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| Challenge: | State-of-the-art guard models rely on terminal-layer representations and overlook safety-relevant features encoded across internal layers. |
| Approach: | They propose a lightweight guard model that harnesses safety neurons from LLM internals without modifying the underlying model. |
| Outcome: | The proposed model outperforms open-source guard models across multiple benchmarks while using 250 fewer trainable parameters. |
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| Challenge: | Existing large language models (LLMs) ignore this diversity by reasoning in a single dominant language. |
| Approach: | They propose a family of reasoning models that can adaptively reason in an advantageous language on a per-instance basis. |
| Outcome: | The proposed model can reason in a single dominant language on a per-instance basis. |
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| Challenge: | Existing methods to train large language models overlook quality of intermediate search results . existing methods often invoke search calls during reasoning, making inference inefficient . |
| Approach: | They propose a dual-objective reinforcement learning framework to improve search strategies of MLLMs . DORA outperforms state-of-the-art methods, achieving up to 8.4% higher accuracy . |
| Outcome: | The proposed model outperforms state-of-the-art methods while reducing search calls by 9.7%. |
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| Challenge: | Recent reasoning-based models cannot fully figure out complex causal relationships between mentioned entities with external knowledge. |
| Approach: | They propose a Tree structure Reasoning schEmA that constructs a multi-hierarchical scalable tree as the reasoning structure to clarify the causal relationships between mentioned entities. |
| Outcome: | Extensive experiments on two public CRS datasets show the proposed model works. |
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| Challenge: | Existing text-only methods suffer from a "Sensory Gap" in integrating new concepts into existing hierarchies. |
| Approach: | They propose a framework leveraging Visual Injection for Taxonomy Completion that maps synthesized images into intrinsic pseudo-tokens and decouples magnitude from selection to prevent visual signals from being drowned out. |
| Outcome: | Experiments on three datasets show that VITC achieves state-of-the-art performance . it delivers an average absolute gain of over 19% in Hit@1. |
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| Challenge: | Existing approaches to solving mathematical problems fall into two broad categories: informal methods and formal methods. |
| Approach: | They propose to use LLM natural-language reasoning to discover answers . they introduce Discover And Prove framework that rewrites Hard Mode statements into Easy Mode ones for existing ATP provers. |
| Outcome: | The proposed framework can be used to prove hard mode statements on ATP benchmarks. |
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| Challenge: | Existing approaches to training document conversion models with manual annotation are costly and time-consuming, and training student models by distilling outputs from teacher models can significantly limit their performance in real-world applications. |
| Approach: | They propose a fully automated framework for constructing high-quality document extraction datasets and models capable of handling diverse document formats and layouts. |
| Outcome: | The proposed model outperforms existing models and improves on annotated documents. |
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| Challenge: | Existing fine-tuning approaches that focus on English-centric training corpora often introduce implicit cross-lingual alignment, overlooking the potential for more profound, latent-level cross-linguistic interactions. |
| Approach: | They propose a multilingual fine-tuning paradigm that explicitly establishes a cross-lingual connection mechanism at the latent level. |
| Outcome: | The proposed model outperforms vanilla SFT and offers a strong latent-level alternative to data-level augmentation methods. |
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| Challenge: | Existing static strategies for mitigating hallucinations do not explicitly model the information gain from interacting with the external environment. |
| Approach: | They propose a calibration-driven interactive learning strategy that selects clarification queries by optimizing calibration error. |
| Outcome: | The proposed method provides theoretical guarantees and empirical gains for reliability. |
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| Challenge: | Large Language Models exhibit strong implicit personalization ability, but most approaches treat this behavior as a black box. |
| Approach: | They propose a mechanistic interpretation perspective and propose 'sparse' set of Preference Heads . they compute a Preference Contribution Score for each attention head and compare their predictions . |
| Outcome: | The proposed framework computes a Preference Contribution Score (PCS) for each attention head and measures its causal impact on user aligned outputs. |
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| Challenge: | Existing studies evaluate efficiency robustness of vision-language models under unrealistic assumptions, requiring access to model architecture and parameters. |
| Approach: | They propose a novel approach to evaluate VLM efficiency robustness in a realistic black-box setting. |
| Outcome: | The proposed approach generates adversarial images with imperceptible perturbations, increasing the computational cost by up to 128.47%. |
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| Challenge: | Multimodal large language models (MLLMs) demonstrate excellent abilities for understanding visual information, but the hallucination remains a challenging problem. |
| Approach: | They propose a training-free approach to enhance vision attention sinks to facilitate convergence of the image token attention sink within shallow layers. |
| Outcome: | The proposed approach improves the convergence of the image token attention sink within shallow layers and strengthens the layer’s focus on the image itself. |
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| Challenge: | Document-level relation extraction is a challenging task as it requires reasoning across multiple sentences. |
| Approach: | They propose to use a recommend-revise scheme to reduce the workload of annotators by providing them with candidate relation instances from distant supervision to supplement and remove relational facts. |
| Outcome: | The proposed dataset is the first large-scale and human-annotated dataset for relation extraction. |
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| Challenge: | Effective evaluation of multi-hop tool use is critical for analyzing the understanding, reasoning, and function-calling capabilities of large language models. |
| Approach: | They propose a dataset that provides rigorous evaluation of multi-hop tool use. |
| Outcome: | The proposed model achieves 49.04% accuracy across five model families. |
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| Challenge: | Existing datasets that evaluate a general understanding of social science are inadequate to understand social norms. |
| Approach: | They propose a multi-agent framework to improve large language models’ ability to understand social norms by comparing them to elementary students. |
| Outcome: | The proposed framework improves large language models to be on par with humans. |
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| Challenge: | Large Multimodal Models (LMMs) exhibit impressive cross-modal understanding and reasoning abilities, but many benchmarks suffer from systematic biases. |
| Approach: | They propose a benchmark to avoid Type-I errors by creating one perception question and one knowledge anchor question through a meticulous annotation process. |
| Outcome: | The proposed benchmark avoids Type-I errors while maintaining reliability of MCQ evaluations. |
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| Challenge: | Existing approaches to textual robustness evaluation focus on slightly modifying the input data, which maintains the original meaning and results in a different prediction. |
| Approach: | They propose a multilingual robustness evaluation toolkit for NLP that integrates universal text transformations, task-specific transformations and adversarial attack. |
| Outcome: | The toolkit includes universal text transformation, task-specific transformation, adversarial attack, subpopulation, and their combinations to provide comprehensive robustness analyses. |
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| Challenge: | Existing relation extraction methods focus on extracting intra-sentence relations for single entities. |
| Approach: | They propose a relation extraction dataset from Wikipedia and Wikidata with three features . document-level relation extraction is a task to identify relational facts between entities . |
| Outcome: | The proposed dataset is the largest human-annotated dataset for document-level RE from plain text. |