Papers by Sophia Ananiadou

49 papers
LongDocFACTScore: Evaluating the Factuality of Long Document Abstractive Summarisation (2024.lrec-main)

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Challenge: Existing metrics for text summarisation have restrictive token limits, limiting their effectiveness.
Approach: They propose a human-annotated data set for evaluating automatic factuality metrics . they propose 'longDocFACTScore' framework which can be extended to any length document .
Outcome: The proposed framework outperforms state-of-the-art metrics in evaluating long document summarisation data sets.
GenerativeRE: Incorporating a Novel Copy Mechanism and Pretrained Model for Joint Entity and Relation Extraction (2021.findings-emnlp)

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Challenge: Existing models for extracting relation triplets suffer from incompletion and disorder problems when they extract multi-token entities from input sentences.
Approach: They propose a special entity labelling method that fine-tunes the pre-trained model and learns the special entity labels simultaneously.
Outcome: The proposed model achieves 4.6% and 0.9% improvement over current methods in the NYT24 and NYT29 benchmark datasets.
A Walk-based Model on Entity Graphs for Relation Extraction (P18-2)

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Challenge: Existing models treat each relation in a sentence individually, but a graph-based model needs to consider multiple relations between entities to model the dependencies among them.
Approach: They propose a graph-based neural network model that treats multiple pairs in a sentence simultaneously and considers interactions among them.
Outcome: The proposed model performs comparable to the state-of-the-art systems on the ACE 2005 dataset without external tools.
Incorporating Zoning Information into Argument Mining from Biomedical Literature (2022.lrec-1)

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Challenge: Argumentative zoning is a text zonation scheme that is used to segment text into zones that serve distinct functions.
Approach: They propose to use zoning information to incorporate into argument mining tasks . they add zonation labels predicted by an off-the-shelf model to the beginning of each sentence .
Outcome: The proposed models improve argument mining models without additional annotation cost.
Span-based Named Entity Recognition by Generating and Compressing Information (2023.eacl-main)

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Challenge: Existing work on Named Entity Recognition (NER) only used generative or information compression models to improve performance.
Approach: They propose to combine two types of IB models into one system to enhance Named Entity Recognition (NER) they incorporate unsupervised generative components span reconstruction and synonym generation into a span-based NER system.
Outcome: The proposed model focuses on learning span representation, which is applicable not only to span-based NER but also to other span-related tasks such as event coreference resolution and question answering.
Locate, Steer, and Improve: A Practical Survey of Actionable Mechanistic Interpretability in Large Language Models (2026.findings-acl)

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Challenge: Existing literature on mechanistic interpretation (MI) treats it as an observational science, leaving practical applications underexplored.
Approach: They propose a survey structured around the pipeline to identify and improve MI models.
Outcome: The proposed framework enables tangible improvements in Alignment, Capability, and Efficiency.
Neuron-Level Knowledge Attribution in Large Language Models (2024.emnlp-main)

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Challenge: Existing methods for attribution of knowledge in large language models struggle to operate at neuron level due to computational constraints.
Approach: They propose a static method for pinpointing significant neurons using three metrics . they also propose identifying "query neurons" which activate these "value neurons"
Outcome: The proposed method shows superior performance across three metrics compared to seven other methods . it analyzes six types of knowledge across attention and feed-forward network layers .
Interpreting Arithmetic Mechanism in Large Language Models through Comparative Neuron Analysis (2024.emnlp-main)

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Challenge: Existing studies have found that arithmetic ability is limited to a few attention heads . existing studies do not elaborate on the mechanisms of these heads or how they influence FFN layers.
Approach: They propose a method that identifies an internal logic chain consisting of four stages from input to prediction.
Outcome: The proposed method improves prediction probabilities by amplifying coefficient scores of FFN neurons related to predictions.
Inter-sentence Relation Extraction with Document-level Graph Convolutional Neural Network (P19-1)

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Challenge: Existing methods for inter-sentence relation extraction do not fully exploit such dependencies.
Approach: They propose a model that captures local and non-local dependencies using multi-instance learning and bi-affine pairwise scoring to predict the relation of an entity pair.
Outcome: The proposed model performs comparable to state-of-the-art models on biochemistry datasets.
Semantic Annotation for Improved Safety in Construction Work (2020.lrec-1)

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Challenge: a number of documents provide evidence of previous incidents and mitigation strategies . but information about previous projects with similar attributes is often hidden within . a new named entity annotation scheme is being developed for construction safety .
Approach: a team of four health and safety experts have developed a named entity annotation scheme for construction safety documents.
Outcome: a new named entity annotation scheme annotates 600 sentences from accident reports . the scheme has an average agreement rate of 0.79 F-Score .
FinChain: A Symbolic Benchmark for Verifiable Chain-of-Thought Financial Reasoning (2026.acl-long)

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Challenge: Existing benchmarks emphasize final numerical answers while neglecting intermediate reasoning steps.
Approach: They propose a symbolic benchmark for verifiable Chain-of-Thought evaluation in finance . FINCHAIN spans 58 topics across 12 financial domains and three difficulty levels .
Outcome: The proposed benchmark aims to bridge symbolic reasoning and factual verification.
A New Corpus to Support Text Mining for the Curation of Metabolites in the ChEBI Database (L18-1)

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Challenge: a corpus of 200 abstracts and 100 full text papers which have been annotated with named entities and relations in the biomedical domain is part of the OpenMinTeD project.
Approach: They propose to annotate 200 abstracts and 100 full text papers with entities and relations in the biomedical domain as part of the OpenMinTeD project.
Outcome: The proposed corpus can be used within ChEBI to facilitate text and data mining and integrate with the OpenMinTeD text and database platform.
Back Attention: Understanding and Enhancing Multi-Hop Reasoning in Large Language Models (2025.emnlp-main)

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Challenge: Increasing the ability of large language models to perform latent multihop reasoning is crucial for reducing the cost and deployment challenges.
Approach: They propose an interpretability method that traces how logits propagate across layers and positions toward the final prediction.
Outcome: The proposed method improves accuracy on five reasoning datasets.
EMPEC: A Comprehensive Benchmark for Evaluating Large Language Models Across Diverse Healthcare Professions (2025.findings-acl)

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Challenge: Recent advances in Large Language Models (LLMs) show their potential in accurately answering biomedical questions, yet current healthcare benchmarks primarily assess knowledge mastered by medical doctors, neglecting other essential professions.
Approach: They evaluated 17 LLMs including proprietary and open-source models and found they struggled with specialized fields and alternative medicine.
Outcome: The examinations for medical PErsonnel in Chinese (EMPEC) features 157,803 exam questions across 124 subjects and 20 healthcare professions.
From n-gram to Attention: How Model Architectures Learn and Propagate Bias in Language Modeling (2025.findings-emnlp)

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Challenge: Current research on bias in language models focuses on data quality, not temporal influences of data.
Approach: They propose a methodology to interpret the interaction between training data and model architecture in bias propagation during language modeling.
Outcome: The proposed method analyzes the interaction between training data and model architecture in bias propagation during language modeling.
FLAG-TRADER: Fusion LLM-Agent with Gradient-based Reinforcement Learning for Financial Trading (2025.findings-acl)

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Challenge: Large language models (LLMs) have impressive reasoning capabilities in financial tasks, but struggle with multi-step, goal-oriented scenarios in interactive financial markets.
Approach: They propose a framework that integrates large language models with gradient-driven reinforcement learning (RL) policy optimization.
Outcome: The proposed framework improves performance in trading and other financial domain tasks.
Connecting the Dots: Document-level Neural Relation Extraction with Edge-oriented Graphs (D19-1)

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Challenge: Existing approaches to document-level relation extraction use nodes and edges as relations between nodes.
Approach: They propose an edge-oriented graph neural model for document-level relation extraction that uses different types of nodes and edges to create a document-based graph.
Outcome: The proposed model can learn intra- and inter-sentence relations using multi-instance learning internally.
Same Claim, Different Judgment: Benchmarking Scenario-Induced Bias in Multilingual Financial Misinformation Detection (2026.findings-acl)

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Challenge: Existing research on LLM biases has focused on direct questioning or general-purpose settings . pronounced behavioral biase despite their growing deployment in financial analysis, forecasting, and decision support.
Approach: They propose a benchmark to evaluate behavioral biases of large language models in MFMD . they use a multilingual financial misinformation dataset to integrate these with misinformation claims .
Outcome: The proposed benchmark evaluates behavioral biases of large language models across economic scenarios.
APLenty: annotation tool for creating high-quality datasets using active and proactive learning (D18-2)

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Challenge: APLenty is an annotation tool for creating high-quality sequence labeling datasets using active and proactive learning.
Approach: They present APLenty, an annotation tool for creating high-quality sequence labeling datasets using active and proactive learning.
Outcome: The proposed tool is highly flexible and can be adapted to various other tasks.
A Neural Layered Model for Nested Named Entity Recognition (N18-1)

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Challenge: Entity mentions embedded in longer entity mentions are referred to as nested entities due to the properties of natural language.
Approach: They propose a neural model that dynamically stacks flat NER layers to identify nested entities by capturing sequential context representation with bidirectional long-term memory.
Outcome: The proposed model outperforms state-of-the-art feature-based systems on nested NER, achieving 74.7% and 72.2% on GENIA and ACE2005 datasets, respectively in terms of F-score.
Text Classification and Prediction in the Legal Domain (2022.lrec-1)

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Challenge: a case study combines text classification and legal judgment prediction for flight compensation . a human-in-the-loop model outperformed human prediction when predicting a claim being successful .
Approach: They combine transformer-based classification models with human-in-the-loop data to classify airlines' responses to flight compensation claims.
Outcome: The proposed models outperform human prediction when predicting a legal claim success.
Investigating Text Simplification Evaluation (2021.findings-acl)

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Challenge: Existing studies show that parallel TS corpora contain inaccurate simplifications and incorrect alignments.
Approach: They propose to improve the distribution of parallel text simplification corpora to build more robust TS models.
Outcome: The proposed models can be improved by improving the distribution of TS datasets.
Locate-then-Merge: Neuron-Level Parameter Fusion for Mitigating Catastrophic Forgetting in Multimodal LLMs (2025.findings-emnlp)

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Challenge: Multimodal instruction tuning often causes catastrophic forgetting of the base LLM’s language ability, even in strong models like Llama3.
Approach: They propose a training-free parameter fusion framework that locates important parameters and selectively merges them.
Outcome: The proposed framework preserves the influence of neurons with large parameter shifts while attenuating the influence . of neurons likely responsible for newly acquired visual capabilities while mitigating language degradation.
SAHM: A Benchmark for Arabic Financial and Shari’ah-Compliant Reasoning (2026.acl-long)

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Challenge: English financial NLP has progressed rapidly through benchmarks for sentiment, document understanding, and financial question answering.
Approach: They propose a document-grounded benchmark and instruction-tuning dataset for Arabic financial NLP and Shari’ah-compliant reasoning.
Outcome: The proposed dataset contains 14,380 expert-verified instances spanning seven tasks . it includes financial sentiment analysis, extractive summarization, and event–cause reasoning .
All That Glisters Is Not Gold: A Benchmark for Reference-Free Counterfactual Financial Misinformation Detection (2026.acl-long)

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Challenge: RFC-Bench evaluates large language models on financial misinformation under realistic news . current models struggle to maintain coherent belief states without external grounding, study finds .
Approach: They propose a benchmark for evaluating large language models on financial misinformation under realistic news.
Outcome: The proposed model performs better when context is available, while reference-free settings expose significant weaknesses.
Paladin: an annotation tool based on active and proactive learning (2021.eacl-demos)

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Challenge: Existing tools for active learning focus on the active learning algorithms and provide no user interface thus making it difficult to use for the end-users.
Approach: They present an open-source web-based annotation tool for creating high-quality multi-label document-level datasets that integrates active learning and proactive learning.
Outcome: The proposed tool is designed for multi-label annotation, but it can be adapted to other tasks in single-l Label settings.
Readability Controllable Biomedical Document Summarization (2022.findings-emnlp)

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Challenge: Existing controllable summarization systems for biomedical documents have little attention to readability control, leaving users with incompatible summaries .
Approach: They propose a task of readability controllable summarization for biomedical documents to generate summaries that are incompatible with users' levels of expertise.
Outcome: The proposed model is based on pre-trained language models with prevalent controlling and generation techniques and evaluates the readability discrepancy between lay and technical summaries.
GRETEL: Graph Contrastive Topic Enhanced Language Model for Long Document Extractive Summarization (2022.coling-1)

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Challenge: Existing approaches to capture and integrate global semantic information are limited due to their limited ability to capture long-range dependencies.
Approach: They propose a graph contrastive topic enhanced language model that integrates a neural topic model with a pre-trained language model to capture global contextual semantics.
Outcome: The proposed model outperforms existing methods on general domain and biomedical datasets.
Distantly Supervised Relation Extraction with Sentence Reconstruction and Knowledge Base Priors (2021.naacl-main)

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Challenge: Existing methods to facilitate distantly supervised relation extraction are noisy instances, long-tail relations and unbalanced bag sizes.
Approach: They propose a multi-task approach to facilitate distantly supervised relation extraction by bringing closer the representations of sentences that contain the same Knowledge Base pairs.
Outcome: The proposed approach improves performance on two datasets created via distant supervision.
SynGraph: A Dynamic Graph-LLM Synthesis Framework for Sparse Streaming User Sentiment Modeling (2025.findings-acl)

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Challenge: Traditional sentiment analysis methods focus on static reviews, failing to capture temporal relationship between user sentiment rating and textual content.
Approach: They propose a dynamic graph-based framework that addresses data sparsity in streaming reviews.
Outcome: The proposed framework reduces data sparsity by categorizing users into mid-tail, long-tail and extreme scenarios and incorporating LLM enhancements within a dynamic graph-based structure.
Towards Interpretable Mental Health Analysis with Large Language Models (2023.emnlp-main)

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Challenge: Existing studies on large language models lack adequate evaluations and prompting strategies for explainability.
Approach: They evaluate the mental health analysis and emotional reasoning ability of large language models (LLMs) using 11 datasets across 5 tasks.
Outcome: The proposed model shows strong in-context learning ability but still has a significant gap with advanced task-specific methods.
HiRAS: A Hierarchical Multi-Agent Framework for Paper-to-Code Generation and Execution (2026.findings-acl)

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Challenge: Existing approaches to automate computational research use fixed sequential agent pipelines with weak global coordination, which limits their robustness and overall performance.
Approach: They propose a hierarchical multi-agent framework for end-to-end paper reproduction that employs supervisory manager agents to coordinate specialised agents across fine-grained stages.
Outcome: The proposed framework improves the paper2code benchmark and significantly reduces hallucination in the evaluation.
Selective Preference Optimization via Token-Level Reward Function Estimation (2025.emnlp-main)

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Challenge: Existing methods for maximizing preference optimization on all available tokens are noisy and inefficient.
Approach: They propose a selective alignment strategy that centers on efficient key token selection without strong, fine-grained supervision signals.
Outcome: The proposed strategy outperforms baseline methods on three benchmarks with up to 60% reduction in training hours.
A Neural Model for Aggregating Coreference Annotation in Crowdsourcing (2020.coling-main)

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Challenge: Existing studies of natural language labelling tasks have shown that crowd-sourced labels can be noisy.
Approach: They split the aggregation into mention classification and coreference chain inference tasks to predict the correct labels.
Outcome: The proposed model predicts the class of each mention using an autoencoder while taking into account the mention’s annotation complexity and annotators’ reliability at different levels.
A Search-based Neural Model for Biomedical Nested and Overlapping Event Detection (D19-1)

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Challenge: Existing structured prediction tasks target nested and overlapping events . a new structured prediction model is proposed that uses a relation graph to detect overlapping and nesting events.
Approach: They propose a search-based neural network structured prediction model that treats the task as a searching problem on a relation graph of trigger-argument structures.
Outcome: The proposed model performs comparable to the state-of-the-art model Turku Event Extraction System (TEES) on the BioNLP Cancer Genetics (CG) Shared Task 2013 without the use of syntactic and hand-engineered features.
RAEmoLLM: Retrieval Augmented LLMs for Cross-Domain Misinformation Detection Using In-Context Learning Based on Emotional Information (2025.acl-long)

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Challenge: Current methods for cross-domain misinformation detection focus on in-domain tasks and do not incorporate significant sentiment and emotion features.
Approach: They propose a retrieval augmented (RAG) LLM framework that incorporates affective information into retrieval databases.
Outcome: The proposed framework improves on three misinformation benchmarks.
Break the Checkbox: Challenging Closed-Style Evaluations of Cultural Alignment in LLMs (2025.emnlp-main)

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Challenge: a large number of studies rely on closed-style multiple-choice surveys to evaluate cultural alignment in Large Language Models . however, these methods are constrained and lack nuanced and accurate evaluations based on specific cultural proxies.
Approach: They propose to use the World Values Survey and Hofstede Cultural Dimensions as case studies to examine cultural alignment in Large Language Models.
Outcome: The findings advocate for more robust evaluation frameworks that focus on cultural proxies.
THCM-CAL: Temporal-Hierarchical Causal Modelling with Conformal Calibration for Clinical Risk Prediction (2025.findings-emnlp)

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Challenge: Existing approaches to risk prediction from EHRs handle structured diagnostic codes and unstructured narrative notes separately.
Approach: They propose a Temporal-Hierarchical Causal Model with Conformal Calibration . they construct a multimodal causal graph where nodes represent clinical entities from two modalities .
Outcome: The proposed model infers three clinically grounded interactions from textual propositions and ICD codes mapped to textual descriptions.
ELAINE-medLLM: Lightweight English Japanese Chinese Trilingual Large Language Model for Bio-medical Domain (2025.coling-main)

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Challenge: Existing bilingual or multilingual medical LLMs are limited in multilingual data and therefore perform poorly in non-English languages such as Japanese and Chinese.
Approach: They propose to use a trilingual (English, Japanese, Chinese) large language model adapted for the bio-medical domain to harness the knowledge and abilities of the base model.
Outcome: The proposed model can support English, Japanese, and Chinese and is adapted for a bio-medical domain.
How do Large Language Models Learn In-Context? Query and Key Matrices of In-Context Heads are Two Towers for Metric Learning (2024.emnlp-main)

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Challenge: In-context learning (ICL) is an emergent ability of large language models.
Approach: They propose to use in-context learning to predict sentences with semantically-unrelated labels on 1% heads to investigate the mechanism.
Outcome: The proposed methods reduce the majority label bias and recency bias by 22% and 17%, respectively.
Learning Disentangled Representations of Negation and Uncertainty (2022.acl-long)

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Challenge: Negation and uncertainty modeling are long-standing tasks in natural language processing.
Approach: They propose to disentangle negation, uncertainty, and content using a Variational Autoencoder by supervising latent representations using auxiliary objectives.
Outcome: The proposed model can disentangle negation, uncertainty, and content using a Variational Autoencoder.
Modelling Instance-Level Annotator Reliability for Natural Language Labelling Tasks (N19-1)

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Challenge: Existing models that estimate annotators' reliability only consider binary labels and multi-class labels.
Approach: They propose an unsupervised model which can handle binary and multi-class labels and integrate neural networks to model the dependency between latent variables and instances.
Outcome: The proposed model can handle binary and multi-class labels and can estimate reliability of annotators across instances.
Revisiting Unsupervised Relation Extraction (2020.acl-main)

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Challenge: Unsupervised relation extraction (URE) extracts relations between named entities from raw text without manually-labelled data and existing knowledge bases (KBs).
Approach: They compare unsupervised relation extraction methods to generative and discriminative approaches . they conclude that entity types provide a strong inductive bias for URE .
Outcome: The proposed method outperforms generative and discriminative approaches on two popular datasets.
RELATE: Generating a linguistically inspired Knowledge Graph for fine-grained emotion classification (2022.lrec-1)

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Challenge: Existing knowledge resources for sentiment analysis (SA) tasks are either large, common-sense knowledge graphs (KGs) that cover a limited amount of polarities/emotions or they are smaller in size (e.g. lexicons) . however, these resources are limited by the low coverage of e.t. and scalability.
Approach: They propose a new directed KG called ‘RELATE’ which incorporates the benefit of semantics without relying on costly human annotation.
Outcome: The proposed KG overcomes low coverage of emotions and scalability issues . it is the first KG of its size to cover Ekman’s six basic emotions that are directed towards entities.
Coreference Resolution in Full Text Articles with BERT and Syntax-based Mention Filtering (D19-57)

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Challenge: Existing systems for coreference resolution are difficult because of their long coreferent chains.
Approach: They propose to use an existing span-based neural coreference resolution system as a baseline . they filter noisy mentions based on parse trees and integrate a highly expressive language model into the system .
Outcome: The proposed system outperforms the baseline system on the CRAFT Shared Tasks 2019 task.
Argument mining as a multi-hop generative machine reading comprehension task (2023.findings-emnlp)

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Challenge: Argument mining is a natural language processing task that aims to generate an argumentative graph given an unstructured argumentative text.
Approach: They propose a new approach which transfers the argument mining task into a multi-hop reading comprehension task by incorporating a "chain of thought" information into the model.
Outcome: The proposed approach surpasses SOTA results on two arguments mining benchmarks.
Plutus: Benchmarking Large Language Models in Low-Resource Greek Finance (2025.emnlp-main)

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Challenge: Greek is the dominant language of the world's merchant navy and is a key language for international trade.
Approach: They propose to develop a Greek financial evaluation benchmark and a financial LLM fine-tuned on Greek-specific financial data to bridge this gap.
Outcome: The proposed benchmarks surpass GPT-4 by 8.33%, GPT- 4o by 26.83%, and Deepseek-V3 by 67.74%.
SpanEmo: Casting Multi-label Emotion Classification as Span-prediction (2021.eacl-main)

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Challenge: Current approaches to ER ignore potential ambiguities, in which multiple emotions overlap.
Approach: They propose a model "SpanEmo" which casts multi-label emotion classification as span-prediction and introduces a loss function focused on modelling multiple co-existing emotions in a sentence.
Outcome: The proposed model can predict multiple co-existing emotions in a sentence and improve model performance and learning meaningful associations between labels and words in the sentence.

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