Papers by Sophia Ananiadou
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| Challenge: | Existing metrics for text summarisation have restrictive token limits, limiting their effectiveness. |
| Approach: | They propose a human-annotated data set for evaluating automatic factuality metrics . they propose 'longDocFACTScore' framework which can be extended to any length document . |
| Outcome: | The proposed framework outperforms state-of-the-art metrics in evaluating long document summarisation data sets. |
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| Challenge: | Existing models for extracting relation triplets suffer from incompletion and disorder problems when they extract multi-token entities from input sentences. |
| Approach: | They propose a special entity labelling method that fine-tunes the pre-trained model and learns the special entity labels simultaneously. |
| Outcome: | The proposed model achieves 4.6% and 0.9% improvement over current methods in the NYT24 and NYT29 benchmark datasets. |
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| Challenge: | Existing models treat each relation in a sentence individually, but a graph-based model needs to consider multiple relations between entities to model the dependencies among them. |
| Approach: | They propose a graph-based neural network model that treats multiple pairs in a sentence simultaneously and considers interactions among them. |
| Outcome: | The proposed model performs comparable to the state-of-the-art systems on the ACE 2005 dataset without external tools. |
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| Challenge: | Argumentative zoning is a text zonation scheme that is used to segment text into zones that serve distinct functions. |
| Approach: | They propose to use zoning information to incorporate into argument mining tasks . they add zonation labels predicted by an off-the-shelf model to the beginning of each sentence . |
| Outcome: | The proposed models improve argument mining models without additional annotation cost. |
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| Challenge: | Existing work on Named Entity Recognition (NER) only used generative or information compression models to improve performance. |
| Approach: | They propose to combine two types of IB models into one system to enhance Named Entity Recognition (NER) they incorporate unsupervised generative components span reconstruction and synonym generation into a span-based NER system. |
| Outcome: | The proposed model focuses on learning span representation, which is applicable not only to span-based NER but also to other span-related tasks such as event coreference resolution and question answering. |
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| Challenge: | Existing literature on mechanistic interpretation (MI) treats it as an observational science, leaving practical applications underexplored. |
| Approach: | They propose a survey structured around the pipeline to identify and improve MI models. |
| Outcome: | The proposed framework enables tangible improvements in Alignment, Capability, and Efficiency. |
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| Challenge: | Existing methods for attribution of knowledge in large language models struggle to operate at neuron level due to computational constraints. |
| Approach: | They propose a static method for pinpointing significant neurons using three metrics . they also propose identifying "query neurons" which activate these "value neurons" |
| Outcome: | The proposed method shows superior performance across three metrics compared to seven other methods . it analyzes six types of knowledge across attention and feed-forward network layers . |
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| Challenge: | Existing studies have found that arithmetic ability is limited to a few attention heads . existing studies do not elaborate on the mechanisms of these heads or how they influence FFN layers. |
| Approach: | They propose a method that identifies an internal logic chain consisting of four stages from input to prediction. |
| Outcome: | The proposed method improves prediction probabilities by amplifying coefficient scores of FFN neurons related to predictions. |
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| Challenge: | Existing methods for inter-sentence relation extraction do not fully exploit such dependencies. |
| Approach: | They propose a model that captures local and non-local dependencies using multi-instance learning and bi-affine pairwise scoring to predict the relation of an entity pair. |
| Outcome: | The proposed model performs comparable to state-of-the-art models on biochemistry datasets. |
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| Challenge: | a number of documents provide evidence of previous incidents and mitigation strategies . but information about previous projects with similar attributes is often hidden within . a new named entity annotation scheme is being developed for construction safety . |
| Approach: | a team of four health and safety experts have developed a named entity annotation scheme for construction safety documents. |
| Outcome: | a new named entity annotation scheme annotates 600 sentences from accident reports . the scheme has an average agreement rate of 0.79 F-Score . |
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| Challenge: | Existing benchmarks emphasize final numerical answers while neglecting intermediate reasoning steps. |
| Approach: | They propose a symbolic benchmark for verifiable Chain-of-Thought evaluation in finance . FINCHAIN spans 58 topics across 12 financial domains and three difficulty levels . |
| Outcome: | The proposed benchmark aims to bridge symbolic reasoning and factual verification. |
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| Challenge: | a corpus of 200 abstracts and 100 full text papers which have been annotated with named entities and relations in the biomedical domain is part of the OpenMinTeD project. |
| Approach: | They propose to annotate 200 abstracts and 100 full text papers with entities and relations in the biomedical domain as part of the OpenMinTeD project. |
| Outcome: | The proposed corpus can be used within ChEBI to facilitate text and data mining and integrate with the OpenMinTeD text and database platform. |
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| Challenge: | Increasing the ability of large language models to perform latent multihop reasoning is crucial for reducing the cost and deployment challenges. |
| Approach: | They propose an interpretability method that traces how logits propagate across layers and positions toward the final prediction. |
| Outcome: | The proposed method improves accuracy on five reasoning datasets. |
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| Challenge: | Recent advances in Large Language Models (LLMs) show their potential in accurately answering biomedical questions, yet current healthcare benchmarks primarily assess knowledge mastered by medical doctors, neglecting other essential professions. |
| Approach: | They evaluated 17 LLMs including proprietary and open-source models and found they struggled with specialized fields and alternative medicine. |
| Outcome: | The examinations for medical PErsonnel in Chinese (EMPEC) features 157,803 exam questions across 124 subjects and 20 healthcare professions. |
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| Challenge: | Current research on bias in language models focuses on data quality, not temporal influences of data. |
| Approach: | They propose a methodology to interpret the interaction between training data and model architecture in bias propagation during language modeling. |
| Outcome: | The proposed method analyzes the interaction between training data and model architecture in bias propagation during language modeling. |
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| Challenge: | Large language models (LLMs) have impressive reasoning capabilities in financial tasks, but struggle with multi-step, goal-oriented scenarios in interactive financial markets. |
| Approach: | They propose a framework that integrates large language models with gradient-driven reinforcement learning (RL) policy optimization. |
| Outcome: | The proposed framework improves performance in trading and other financial domain tasks. |
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| Challenge: | Existing approaches to document-level relation extraction use nodes and edges as relations between nodes. |
| Approach: | They propose an edge-oriented graph neural model for document-level relation extraction that uses different types of nodes and edges to create a document-based graph. |
| Outcome: | The proposed model can learn intra- and inter-sentence relations using multi-instance learning internally. |
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| Challenge: | Existing research on LLM biases has focused on direct questioning or general-purpose settings . pronounced behavioral biase despite their growing deployment in financial analysis, forecasting, and decision support. |
| Approach: | They propose a benchmark to evaluate behavioral biases of large language models in MFMD . they use a multilingual financial misinformation dataset to integrate these with misinformation claims . |
| Outcome: | The proposed benchmark evaluates behavioral biases of large language models across economic scenarios. |
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| Challenge: | APLenty is an annotation tool for creating high-quality sequence labeling datasets using active and proactive learning. |
| Approach: | They present APLenty, an annotation tool for creating high-quality sequence labeling datasets using active and proactive learning. |
| Outcome: | The proposed tool is highly flexible and can be adapted to various other tasks. |
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| Challenge: | Entity mentions embedded in longer entity mentions are referred to as nested entities due to the properties of natural language. |
| Approach: | They propose a neural model that dynamically stacks flat NER layers to identify nested entities by capturing sequential context representation with bidirectional long-term memory. |
| Outcome: | The proposed model outperforms state-of-the-art feature-based systems on nested NER, achieving 74.7% and 72.2% on GENIA and ACE2005 datasets, respectively in terms of F-score. |
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| Challenge: | a case study combines text classification and legal judgment prediction for flight compensation . a human-in-the-loop model outperformed human prediction when predicting a claim being successful . |
| Approach: | They combine transformer-based classification models with human-in-the-loop data to classify airlines' responses to flight compensation claims. |
| Outcome: | The proposed models outperform human prediction when predicting a legal claim success. |
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| Challenge: | Existing studies show that parallel TS corpora contain inaccurate simplifications and incorrect alignments. |
| Approach: | They propose to improve the distribution of parallel text simplification corpora to build more robust TS models. |
| Outcome: | The proposed models can be improved by improving the distribution of TS datasets. |
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| Challenge: | Multimodal instruction tuning often causes catastrophic forgetting of the base LLM’s language ability, even in strong models like Llama3. |
| Approach: | They propose a training-free parameter fusion framework that locates important parameters and selectively merges them. |
| Outcome: | The proposed framework preserves the influence of neurons with large parameter shifts while attenuating the influence . of neurons likely responsible for newly acquired visual capabilities while mitigating language degradation. |
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| Challenge: | English financial NLP has progressed rapidly through benchmarks for sentiment, document understanding, and financial question answering. |
| Approach: | They propose a document-grounded benchmark and instruction-tuning dataset for Arabic financial NLP and Shari’ah-compliant reasoning. |
| Outcome: | The proposed dataset contains 14,380 expert-verified instances spanning seven tasks . it includes financial sentiment analysis, extractive summarization, and event–cause reasoning . |
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| Challenge: | RFC-Bench evaluates large language models on financial misinformation under realistic news . current models struggle to maintain coherent belief states without external grounding, study finds . |
| Approach: | They propose a benchmark for evaluating large language models on financial misinformation under realistic news. |
| Outcome: | The proposed model performs better when context is available, while reference-free settings expose significant weaknesses. |
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| Challenge: | Existing tools for active learning focus on the active learning algorithms and provide no user interface thus making it difficult to use for the end-users. |
| Approach: | They present an open-source web-based annotation tool for creating high-quality multi-label document-level datasets that integrates active learning and proactive learning. |
| Outcome: | The proposed tool is designed for multi-label annotation, but it can be adapted to other tasks in single-l Label settings. |
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| Challenge: | Existing controllable summarization systems for biomedical documents have little attention to readability control, leaving users with incompatible summaries . |
| Approach: | They propose a task of readability controllable summarization for biomedical documents to generate summaries that are incompatible with users' levels of expertise. |
| Outcome: | The proposed model is based on pre-trained language models with prevalent controlling and generation techniques and evaluates the readability discrepancy between lay and technical summaries. |
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| Challenge: | Existing approaches to capture and integrate global semantic information are limited due to their limited ability to capture long-range dependencies. |
| Approach: | They propose a graph contrastive topic enhanced language model that integrates a neural topic model with a pre-trained language model to capture global contextual semantics. |
| Outcome: | The proposed model outperforms existing methods on general domain and biomedical datasets. |
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| Challenge: | Existing methods to facilitate distantly supervised relation extraction are noisy instances, long-tail relations and unbalanced bag sizes. |
| Approach: | They propose a multi-task approach to facilitate distantly supervised relation extraction by bringing closer the representations of sentences that contain the same Knowledge Base pairs. |
| Outcome: | The proposed approach improves performance on two datasets created via distant supervision. |
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| Challenge: | Existing evaluations of LLMs in finance are text-only, monolingual, and largely saturated by current models. |
| Approach: | They propose a multilingual and multimodal benchmark for evaluating LLMs in real financial contexts. |
| Outcome: | The first expert-annotated multilingual and multimodal benchmark is released . it evaluates 21 leading LLMs and shows they perform better in multilingual settings . |
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| Challenge: | Traditional sentiment analysis methods focus on static reviews, failing to capture temporal relationship between user sentiment rating and textual content. |
| Approach: | They propose a dynamic graph-based framework that addresses data sparsity in streaming reviews. |
| Outcome: | The proposed framework reduces data sparsity by categorizing users into mid-tail, long-tail and extreme scenarios and incorporating LLM enhancements within a dynamic graph-based structure. |
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| Challenge: | Existing studies on large language models lack adequate evaluations and prompting strategies for explainability. |
| Approach: | They evaluate the mental health analysis and emotional reasoning ability of large language models (LLMs) using 11 datasets across 5 tasks. |
| Outcome: | The proposed model shows strong in-context learning ability but still has a significant gap with advanced task-specific methods. |
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| Challenge: | Existing approaches to automate computational research use fixed sequential agent pipelines with weak global coordination, which limits their robustness and overall performance. |
| Approach: | They propose a hierarchical multi-agent framework for end-to-end paper reproduction that employs supervisory manager agents to coordinate specialised agents across fine-grained stages. |
| Outcome: | The proposed framework improves the paper2code benchmark and significantly reduces hallucination in the evaluation. |
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| Challenge: | Existing methods for maximizing preference optimization on all available tokens are noisy and inefficient. |
| Approach: | They propose a selective alignment strategy that centers on efficient key token selection without strong, fine-grained supervision signals. |
| Outcome: | The proposed strategy outperforms baseline methods on three benchmarks with up to 60% reduction in training hours. |
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| Challenge: | Existing studies of natural language labelling tasks have shown that crowd-sourced labels can be noisy. |
| Approach: | They split the aggregation into mention classification and coreference chain inference tasks to predict the correct labels. |
| Outcome: | The proposed model predicts the class of each mention using an autoencoder while taking into account the mention’s annotation complexity and annotators’ reliability at different levels. |
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| Challenge: | Existing structured prediction tasks target nested and overlapping events . a new structured prediction model is proposed that uses a relation graph to detect overlapping and nesting events. |
| Approach: | They propose a search-based neural network structured prediction model that treats the task as a searching problem on a relation graph of trigger-argument structures. |
| Outcome: | The proposed model performs comparable to the state-of-the-art model Turku Event Extraction System (TEES) on the BioNLP Cancer Genetics (CG) Shared Task 2013 without the use of syntactic and hand-engineered features. |
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| Challenge: | Current methods for cross-domain misinformation detection focus on in-domain tasks and do not incorporate significant sentiment and emotion features. |
| Approach: | They propose a retrieval augmented (RAG) LLM framework that incorporates affective information into retrieval databases. |
| Outcome: | The proposed framework improves on three misinformation benchmarks. |
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| Challenge: | a large number of studies rely on closed-style multiple-choice surveys to evaluate cultural alignment in Large Language Models . however, these methods are constrained and lack nuanced and accurate evaluations based on specific cultural proxies. |
| Approach: | They propose to use the World Values Survey and Hofstede Cultural Dimensions as case studies to examine cultural alignment in Large Language Models. |
| Outcome: | The findings advocate for more robust evaluation frameworks that focus on cultural proxies. |
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| Challenge: | Existing approaches to risk prediction from EHRs handle structured diagnostic codes and unstructured narrative notes separately. |
| Approach: | They propose a Temporal-Hierarchical Causal Model with Conformal Calibration . they construct a multimodal causal graph where nodes represent clinical entities from two modalities . |
| Outcome: | The proposed model infers three clinically grounded interactions from textual propositions and ICD codes mapped to textual descriptions. |
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| Challenge: | Existing bilingual or multilingual medical LLMs are limited in multilingual data and therefore perform poorly in non-English languages such as Japanese and Chinese. |
| Approach: | They propose to use a trilingual (English, Japanese, Chinese) large language model adapted for the bio-medical domain to harness the knowledge and abilities of the base model. |
| Outcome: | The proposed model can support English, Japanese, and Chinese and is adapted for a bio-medical domain. |
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| Challenge: | In-context learning (ICL) is an emergent ability of large language models. |
| Approach: | They propose to use in-context learning to predict sentences with semantically-unrelated labels on 1% heads to investigate the mechanism. |
| Outcome: | The proposed methods reduce the majority label bias and recency bias by 22% and 17%, respectively. |
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| Challenge: | Negation and uncertainty modeling are long-standing tasks in natural language processing. |
| Approach: | They propose to disentangle negation, uncertainty, and content using a Variational Autoencoder by supervising latent representations using auxiliary objectives. |
| Outcome: | The proposed model can disentangle negation, uncertainty, and content using a Variational Autoencoder. |
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| Challenge: | Existing models that estimate annotators' reliability only consider binary labels and multi-class labels. |
| Approach: | They propose an unsupervised model which can handle binary and multi-class labels and integrate neural networks to model the dependency between latent variables and instances. |
| Outcome: | The proposed model can handle binary and multi-class labels and can estimate reliability of annotators across instances. |
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| Challenge: | Unsupervised relation extraction (URE) extracts relations between named entities from raw text without manually-labelled data and existing knowledge bases (KBs). |
| Approach: | They compare unsupervised relation extraction methods to generative and discriminative approaches . they conclude that entity types provide a strong inductive bias for URE . |
| Outcome: | The proposed method outperforms generative and discriminative approaches on two popular datasets. |
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| Challenge: | Existing knowledge resources for sentiment analysis (SA) tasks are either large, common-sense knowledge graphs (KGs) that cover a limited amount of polarities/emotions or they are smaller in size (e.g. lexicons) . however, these resources are limited by the low coverage of e.t. and scalability. |
| Approach: | They propose a new directed KG called ‘RELATE’ which incorporates the benefit of semantics without relying on costly human annotation. |
| Outcome: | The proposed KG overcomes low coverage of emotions and scalability issues . it is the first KG of its size to cover Ekman’s six basic emotions that are directed towards entities. |
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| Challenge: | Existing systems for coreference resolution are difficult because of their long coreferent chains. |
| Approach: | They propose to use an existing span-based neural coreference resolution system as a baseline . they filter noisy mentions based on parse trees and integrate a highly expressive language model into the system . |
| Outcome: | The proposed system outperforms the baseline system on the CRAFT Shared Tasks 2019 task. |
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| Challenge: | Argument mining is a natural language processing task that aims to generate an argumentative graph given an unstructured argumentative text. |
| Approach: | They propose a new approach which transfers the argument mining task into a multi-hop reading comprehension task by incorporating a "chain of thought" information into the model. |
| Outcome: | The proposed approach surpasses SOTA results on two arguments mining benchmarks. |
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| Challenge: | Greek is the dominant language of the world's merchant navy and is a key language for international trade. |
| Approach: | They propose to develop a Greek financial evaluation benchmark and a financial LLM fine-tuned on Greek-specific financial data to bridge this gap. |
| Outcome: | The proposed benchmarks surpass GPT-4 by 8.33%, GPT- 4o by 26.83%, and Deepseek-V3 by 67.74%. |
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| Challenge: | Current approaches to ER ignore potential ambiguities, in which multiple emotions overlap. |
| Approach: | They propose a model "SpanEmo" which casts multi-label emotion classification as span-prediction and introduces a loss function focused on modelling multiple co-existing emotions in a sentence. |
| Outcome: | The proposed model can predict multiple co-existing emotions in a sentence and improve model performance and learning meaningful associations between labels and words in the sentence. |