Papers by Lei Bai
Dolphin: Moving Towards Closed-loop Auto-research through Thinking, Practice, and Feedback (2025.acl-long)
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Jiakang Yuan, Xiangchao Yan, Bo Zhang, Tao Chen, Botian Shi, Wanli Ouyang, Yu Qiao, Lei Bai, Bowen Zhou
| Challenge: | Recent studies show that AI-assisted research methods can improve research efficiency . a closed-loop framework is used to enhance the automation level of scientific research . |
| Approach: | They propose a closed-loop LLM-driven framework to enhance the automation level of scientific research. |
| Outcome: | The proposed framework improves the efficiency of scientific research by improving data analysis, accelerating computation, and fostering novel idea generation. |
MSEarth: A Multimodal Benchmark for Earth Science Phenomenon Discovery with MLLMs (2026.acl-long)
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Xiangyu Zhao, Wanghan Xu, Bo Liu, Yuhao Zhou, Fenghua Ling, Ben Fei, Xiaoyu Yue, Lei Bai, Wenlong Zhang, Xiao-Ming Wu
| Challenge: | Existing datasets often rely on synthetic data or figure-caption pairs, failing to capture the depth and complexity of geoscientific reasoning. |
| Approach: | They propose a multimodal scientific dataset and benchmark curated from open-access publications. |
| Outcome: | MSEarth features over 289K figures with captions enriched by contextual discussions and reasoning from original papers. |
LongCite: Enabling LLMs to Generate Fine-grained Citations in Long-Context QA (2025.findings-acl)
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Jiajie Zhang, Yushi Bai, Xin Lv, Wanjun Gu, Danqing Liu, Minhao Zou, Shulin Cao, Lei Hou, Yuxiao Dong, Ling Feng, Juanzi Li
| Challenge: | Current long-context large language models lack citations to support their responses, making verification difficult due to potential hallucinations. |
| Approach: | They propose to use off-the-shelf LLMs to automatically construct long-context QA instances with precise sentence-level citations and leverage this pipeline to construct a large-scale SFT dataset for LQAC. |
| Outcome: | The proposed pipeline can generate responses with fine-grained citations on the fly, surpassing existing models including GPT-4o. |
Chart-MRAG: Benchmarking Multimodal Retrieval Augmented Generation on Chart-based Documents (2026.acl-long)
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null Ymyang, Jiang Zhong, Li Jin, Xiao Sun, Jingwang Huang, null Gaojinpeng, Qing Liu, Yang Bai, Jingyuan Zhang, Rui Jiang, Qin Lei, Kaiwen Wei
| Challenge: | Existing benchmarks focus on simple image-text interactions, overlooking complex visual formats like charts. |
| Approach: | They propose a semi-automatic framework for generating evaluation samples through multi-modal keypoint extraction, knowledge graph construction, and qa pair synthesis. |
| Outcome: | The proposed framework generates 4,738 question-answering pairs across 8 domains from real-world documents. |
WaterBench: Towards Holistic Evaluation of Watermarks for Large Language Models (2024.acl-long)
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| Challenge: | Recent studies have developed watermarking algorithms which restrict the generation process to leave an invisible trace for watermark detection. |
| Approach: | They propose a benchmarking procedure that compares different methods to ensure consistent watermarking strength and jointly evaluates their generation and detection performance. |
| Outcome: | The proposed benchmark compares 4 open-source watermarks on 2 LLMs under 2 watermarking strengths and observes the common struggles for current methods on maintaining the generation quality. |
MinerU2.5: A Decoupled Vision-Language Model for Efficient High-Resolution Document Parsing (2026.acl-industry)
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Junbo Niu, Zheng Liu, Zhuangcheng Gu, Bin Wang, Linke Ouyang, Zhiyuan Zhao, Tao Chu, Tianyao He, Fan Wu, Qintong Zhang, Zhenjiang Jin, Guang Liang, Rui Zhang, Wenzheng Zhang, Yuan Qu, Zhifei Ren, Yuefeng Sun, Zirui Tang, Boyu Niu, Yuanhong Zheng, Dongsheng Ma, Ziyang Miao, Hejun Dong, Siyi Qian, Junyuan Zhang, Fangdong Wang, Jingzhou Chen, Xiaomeng Zhao, Liqun Wei, Wei Li, Shasha Wang, RuiLiang Xu, Yuanyuan Cao, Lu Chen, Qianqian Wu, Huaiyu Gu, Lindong Lu, Dechen Lin, null Shenguanlin, Xuanhe Zhou, Linfeng Zhang, Yuhang Zang, Xiaoyi Dong, Jiaqi Wang, Bo Zhang, Lei Bai, Pei Chu, Weijia Li, Jiang Wu, Lijun Wu, Zhenxiang Li, Guangyu Wang, Zhongying Tu, Chao Xu, Kai Chen, Bowen Zhou, Dahua Lin, Wentao Zhang, Conghui He
| Challenge: | Document images are characterized by higher resolutions, denser content, and more complex structural layouts. |
| Approach: | They propose a 1.2B-parameter document parsing vision-language model that decouples layout analysis from local content recognition. |
| Outcome: | The proposed model surpasses general-purpose and domain-specific models on multiple benchmarks while maintaining significantly lower computational overhead. |
LongBench v2: Towards Deeper Understanding and Reasoning on Realistic Long-context Multitasks (2025.acl-long)
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Yushi Bai, Shangqing Tu, Jiajie Zhang, Hao Peng, Xiaozhi Wang, Xin Lv, Shulin Cao, Jiazheng Xu, Lei Hou, Yuxiao Dong, Jie Tang, Juanzi Li
| Challenge: | Existing benchmarks on longcontext large language models fail to reflect their deep understanding capabilities across diverse tasks. |
| Approach: | They propose a benchmark to assess the ability of long-context large language models to handle long-text problems. |
| Outcome: | The proposed model achieves 50.1% accuracy when directly answering the questions . human experts achieve only 53.7% accuracy under a 15-minute time constraint . |
WildDoc: How Far Are We from Achieving Comprehensive and Robust Document Understanding in the Wild? (2025.emnlp-main)
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An-Lan Wang, Jingqun Tang, Lei Liao, Hao Feng, Qi Liu, Xiang Fei, Jinghui Lu, Han Wang, Hao Liu, Yuliang Liu, Xiang Bai, Can Huang
| Challenge: | Existing benchmarks for document understanding in the wild are based on scanned or digital documents . however, these benchmarks fail to capture the challenges posed by documents in the real world . |
| Approach: | They propose a new benchmark that incorporates a diverse set of manually captured document images reflecting real-world conditions. |
| Outcome: | The proposed model is based on a set of manually captured document images reflecting real-world conditions and is compared with digital or scanned documents. |
LLMRouterBench: A Massive Benchmark and Unified Framework for LLM Routing (2026.findings-acl)
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Hao Li, Yiqun Zhang, Zhaoyan Guo, Chenxu Wang, Shengji Tang, Qiaosheng Zhang, Yang Chen, Biqing Qi, Peng Ye, Lei Bai, Zhen Wang, Shuyue Hu
| Challenge: | Large language model (LLM) routing assigns each query to the best suitable model from an ensemble. |
| Approach: | They introduce a large-scale benchmark and unified framework for LLM routing . they find that many routing methods exhibit similar performance under unified evaluation . |
| Outcome: | The proposed benchmark provides comprehensive metrics for both performance-oriented and performance-cost trade-off routing. |
SURVEYFORGE : On the Outline Heuristics, Memory-Driven Generation, and Multi-dimensional Evaluation for Automated Survey Writing (2025.acl-long)
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| Challenge: | SURVEYFORGE automates survey paper writing, but quality gap between LLM-generated and human-written surveys remains significant. |
| Approach: | They propose a survey tool that automatically generates and refines human-written surveys. |
| Outcome: | Experiments show that SURVEYFORGE outperforms previous work such as AutoSurvey in outline quality and content quality. |
R3: End-to-End Reasoning-based Planning for Multi-step Retrosynthesis via Reinforcement Learning (2026.acl-long)
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YiFei Wang, Qizhi Pei, Jiangtao Feng, Yuntian Shi, Yi Duan, Lihao Wang, Lei Bai, Lijun Wu, Wei-Ying Ma, Hao Zhou
| Challenge: | Experimental results show that R3 is a superior alternative to traditional search algorithms for multistep retrosynthesis planning. |
| Approach: | They propose a framework that reformulates multistep retrosynthetic planning as a generative reasoning task. |
| Outcome: | The proposed framework achieves state-of-the-art Top-1 accuracy of 43.7% on retrobench . it leverages Large Language Models to reformulate multistep retrosynthesis as a generative reasoning task. |
Nature-Inspired Population-Based Evolution of Large Language Models (2026.acl-long)
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| Challenge: | a new framework for population-based evolution of large language models is emerging . a population-driven evolution of LLMs is a key component of evolution, authors say . |
| Approach: | They propose a framework that allows for population-based evolution of large language models . they start with a population of parent LLMs and allow this population to evolve . |
| Outcome: | The proposed framework outperforms existing methods on 12 datasets. |
GLTW: Joint Improved Graph Transformer and LLM via Three-Word Language for Knowledge Graph Completion (2025.findings-acl)
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Kangyang Luo, Yuzhuo Bai, Cheng Gao, Shuzheng Si, Zhu Liu, Yingli Shen, Zhitong Wang, Cunliang Kong, Wenhao Li, Yufei Huang, Ye Tian, Xuantang Xiong, Lei Han, Maosong Sun
| Challenge: | Existing knowledge graphs lack the ability to integrate structural information into LLMs and output predictions deterministically. |
| Approach: | They propose a method which encodes structural information of KGs and merges it with LLMs to enhance KGC performance. |
| Outcome: | The proposed method improves the performance of KG Completion datasets on KGs by integrating structural information with LLMs. |
OlympiadBench: A Challenging Benchmark for Promoting AGI with Olympiad-Level Bilingual Multimodal Scientific Problems (2024.acl-long)
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Chaoqun He, Renjie Luo, Yuzhuo Bai, Shengding Hu, Zhen Thai, Junhao Shen, Jinyi Hu, Xu Han, Yujie Huang, Yuxiang Zhang, Jie Liu, Lei Qi, Zhiyuan Liu, Maosong Sun
| Challenge: | Large Language Models (LLMs) and Large Multimodal Models have exceeded general human capabilities in various tasks. |
| Approach: | They present an Olympiad-level bilingual multimodal scientific benchmark featuring 8,476 problems from Olympiad level mathematics and physics competitions. |
| Outcome: | The best performing model, GPT-4V, attains an average score of 17.97% on OlympiadBench, with a mere 10.74% in physics, highlighting the benchmark rigor and the intricacy of physical reasoning. |
MTR-DuplexBench: Towards a Comprehensive Evaluation of Multi-Round Conversations for Full-Duplex Speech Language Models (2026.findings-acl)
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| Challenge: | Existing benchmarks focus on evaluating single-round interactions, neglecting other critical aspects. |
| Approach: | They propose a benchmark to evaluate full-duplex speech language models in multi-round settings . they segment continuous full-dual dialogues into discrete turns for evaluation . |
| Outcome: | The proposed benchmark compared full-duplex speech language models with full-dual speech models . the results show that the models perform better in multi-round settings than standard models compared to benchmarks . |
FlowSearch: Advancing Deep Research with Dynamic Structured Knowledge Flow (2026.acl-long)
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Yusong Hu, Runmin Ma, Yue Fan, Jinxin Shi, Zongsheng Cao, Yuhao Zhou, Jiakang Yuan, Shuaiyu Zhang, Shiyang Feng, Xiangchao Yan, Shufei Zhang, Wenlong Zhang, Lei Bai, Bo Zhang
| Challenge: | FlowSearch is a multi-agent framework that actively constructs and evolves a dynamic structured knowledge flow to drive subtask execution and reasoning. |
| Approach: | They propose a multi-agent framework that actively constructs and evolves a dynamic structured knowledge flow to drive subtask execution and reasoning. |
| Outcome: | The proposed framework achieves competitive performance on GAIA, HLE, GPQA and TRQA benchmarks and is available to download. |
ReSo: A Reward-driven Self-organizing LLM-based Multi-Agent System for Reasoning Tasks (2025.emnlp-main)
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| Challenge: | Multi-agent systems (MAS) are limited by poor flexibility and scalability, with underdeveloped optimization strategies. |
| Approach: | They propose a task graph generation and a reward-driven two-stage agent selection process to integrate multi-agent systems to improve their reasoning capabilities. |
| Outcome: | The proposed model outperforms existing methods on Math-MAS and SciBench-MAS SciBech, while other methods completely fail. |
Cross-lingual Supervision Improves Unsupervised Neural Machine Translation (2021.naacl-industry)
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| Challenge: | Existing models that use only monolingual data have not been fully duplicated in the vast majority of language pairs, especially for zero-source languages. |
| Approach: | They propose to leverage the corpus from En-Fr and En-De to collectively train the translation from one language into many languages under one model. |
| Outcome: | The proposed model significantly improves translation quality with a big margin in the benchmark unsupervised translation tasks and achieves comparable performance to supervised NMT. |
Pre-training Distillation for Large Language Models: A Design Space Exploration (2025.acl-long)
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| Challenge: | Knowledge distillation (KD) aims to transfer knowledge from a large teacher model to a smaller student model for model compression. |
| Approach: | They extend knowledge distillation to the pre-training phase of large language models . they first conduct an experiment using a teacher LLM to distill a 1.9B student LLM . |
| Outcome: | The proposed model can be used to distill a 1.9B student model using a teacher LLM. |
Easy Samples Are All You Need: Self-Evolving LLMs via Data-Efficient Reinforcement Learning (2026.findings-acl)
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| Challenge: | Experimental results show that EasyRL consistently outperforms state-of-the-art baselines due to the substantial annotation cost and issues such as model collapse or reward hacking. |
| Approach: | They propose a supervised RL approach with a divide-and-conquer strategy that simulates the human cognitive acquisition curve using easy labeled data. |
| Outcome: | The proposed approach outperforms state-of-the-art models on mathematical and scientific benchmarks using only 10% of easy labeled data. |
SQUIRE: A Sequence-to-sequence Framework for Multi-hop Knowledge Graph Reasoning (2022.emnlp-main)
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| Challenge: | Existing methods for multi-hop knowledge graph reasoning suffer from slow and poor convergence . a transformer model can be used to learn and predict in an end-to-end fashion, giving faster convergence compared to previous methods . |
| Approach: | They propose a Sequence-to-sequence based multi-hop reasoning framework . it uses an encoder-decoder transformer structure to translate the query to a path . |
| Outcome: | The proposed framework can learn and predict in an end-to-end fashion, which gives better and faster convergence. |
MM-MATH: Advancing Multimodal Math Evaluation with Process Evaluation and Fine-grained Classification (2024.findings-emnlp)
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| Challenge: | Existing benchmarks for multimodal reasoning in large multimodal models are underperforming on multimodal tasks. |
| Approach: | They propose a benchmark for multimodal reasoning in large multimodal models, MM-MATH . MM's process evaluation employs LMM-as-a-judge to automatically analyze solution steps . diagram misinterpretation is the most common error, they find . |
| Outcome: | The proposed model achieves only 31% accuracy, compared to 82% for humans. |
A Survey of Reinforcement Learning for Large Language Models under Data Scarcity: Challenges and Solutions (2026.acl-long)
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Zhiyin Yu, Yuchen Mou, Juncheng Yan, Junyu Luo, Chunchun Chen, Xing Wei, Yunhui Liu, Hongru Sun, Yuxing Zhang, Jun Xu, Yatao Bian, Ming Zhang, Wei Ye, Tieke He, Jie Yang, Guanjie Zheng, Zhonghai Wu, Bo Zhang, Lei Bai, Xiao Luo
| Challenge: | Existing research on reinforcement learning for LLMs under data scarcity has not been unified. |
| Approach: | They propose a top-up hierarchical framework built around three complementary perspectives: data-centric, training-centric and framework-centric. |
| Outcome: | The proposed framework provides a clear conceptual foundation for understanding the design space of data-efficient RL for large language models and to guide researchers working in this emerging area. |
Aspect Is Not You Need: No-aspect Differential Sentiment Framework for Aspect-based Sentiment Analysis (2022.naacl-main)
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| Challenge: | Existing approaches to classify aspects with aspect sentiment bias are hard to find . |
| Approach: | They propose a no-aspect differential sentiment framework for the ABSA task that eliminates aspect sentiment bias and uses differential sentiment loss instead of cross-entropy loss to better classify the sentiments. |
| Outcome: | The proposed framework can be combined with almost all traditional ABSA methods. |
LongBench: A Bilingual, Multitask Benchmark for Long Context Understanding (2024.acl-long)
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Yushi Bai, Xin Lv, Jiajie Zhang, Hongchang Lyu, Jiankai Tang, Zhidian Huang, Zhengxiao Du, Xiao Liu, Aohan Zeng, Lei Hou, Yuxiao Dong, Jie Tang, Juanzi Li
| Challenge: | Large language models (LLMs) can only handle texts a few thousand tokens long, limiting their applications on longer sequence inputs, such as books, reports, and codebases. |
| Approach: | They propose a bilingual, multi-task benchmark for long context understanding that extends context windows and more sophisticated memory mechanisms to improve models' long context capabilities. |
| Outcome: | The proposed model outperforms open-source models but struggles on longer contexts. |
LongAlign: A Recipe for Long Context Alignment of Large Language Models (2024.findings-emnlp)
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| Challenge: | Existing studies to build long context language models focus on context extension and continual training on long text. |
| Approach: | They propose a recipe for instruction fine-tuning on input sequences of similar length . they adopt packing and sorted batching strategies to speed up supervised fine-uning . |
| Outcome: | The proposed model outperforms existing recipes for LLMs in long context tasks by 30% while maintaining proficiency in handling short, generic tasks. |
A Scalable Multi-LLM Collaboration System with Retrieval-based Selection and Exploration-Exploitation-Driven Enhancement (2026.acl-long)
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Shengji Tang, Jianjian Cao, Weihao Lin, Jiale Hong, Bo Zhang, Shuyue Hu, Lei Bai, Tao Chen, Wanli Ouyang, Peng Ye
| Challenge: | Existing multi-LLM collaboration systems often encounter scalability challenges when integrating new LLMs and tasks. |
| Approach: | They propose a Scalable Multi-LLM Collaboration System to coordinate multiple open-source LLMs. |
| Outcome: | The proposed system outperforms prevailing closed-source LLMs on eight mainstream benchmarks on multiple tasks. |
Ruler: A Model-Agnostic Method to Control Generated Length for Large Language Models (2024.findings-emnlp)
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| Challenge: | Large language models struggle to meet user’s needs when required to generate responses of a specific length due to their inherent difficulty in accurately perceiving numerical constraints. |
| Approach: | They propose a Target Length Generation Task and propose RULER, a model-agnostic approach that controls generated length for large language models. |
| Outcome: | The proposed model-agnostic approach improves instruction-following ability of large language models under length-constrained instructions and can generate appropriate MLT when length constraints are not explicitly provided. |
Extending Context Window of Large Language Models via Semantic Compression (2024.findings-acl)
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| Challenge: | Existing models rely on a quadratic computation to generate long texts . current models impose limitations on the length of text inputs . |
| Approach: | They propose a semantic compression method that extends the context window of large language models . the method reduces the semantic redundancy of long inputs before passing them to the LLMs . |
| Outcome: | The proposed method extends the context window of large language models across tasks . it exhibits consistent fluency in text generation while reducing associated computational overhead. |
Edge-free but Structure-aware: Prototype-Guided Knowledge Distillation from GNNs to MLPs (2025.coling-main)
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| Challenge: | Existing methods to train low-latency multilayer perceptrons (MLPs) on graph tasks are based on graph nodes and lack graph structural information. |
| Approach: | They propose to distill graph structural information from Graph Neural Networks (GNNs) to low-latency multilayer perceptrons (MLPs) on graph tasks. |
| Outcome: | The proposed method does not require graph edges (edge-free setting) yet learns structure-aware MLPs. |
Faster and Better LLMs via Latency-Aware Test-Time Scaling (2025.findings-emnlp)
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| Challenge: | Existing research has overlooked the efficiency of TTS from a latency-sensitive perspective. |
| Approach: | They propose two approaches to achieve latency-optimal TTS by branch-wise parallelism and sequence-wise parallelism. |
| Outcome: | The proposed approach achieves latency-optimal TTS for large models . branch-wise parallelism and sequence-wise parallelism are key approaches . |
From Completion to Editing: Unlocking Context-Aware Code Infilling via Search-and-Replace Instruction Tuning (2026.acl-long)
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Jiajun Zhang, Zeyu Cui, Jiaxi Yang, Lei Zhang, Yuheng Jing, Zeyao Ma, Tianyi Bai, Zilei Wang, Qiang Liu, Liang Wang, Binyuan Hui, Junyang Lin
| Challenge: | Fill-in-the-Middle (FIM) models suffer from performance degradation and prohibitive latency. |
| Approach: | They propose a search-and-replace infilling framework that integrates agentic verification and editing into a single-pass inference process. |
| Outcome: | The proposed framework harmonizes completion tasks with the instruction-following priors of Chat LLMs, extending the paradigm from static infilling to dynamic context-aware editing. |
SimpleDeepSearcher: Deep Information Seeking via Web-Powered Reasoning Trajectory Synthesis (2025.findings-emnlp)
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Shuang Sun, Huatong Song, Yuhao Wang, Ruiyang Ren, Jinhao Jiang, Junjie Zhang, Fei Bai, Jia Deng, Xin Zhao, Zheng Liu, Lei Fang, Zhongyuan Wang, Ji-Rong Wen
| Challenge: | Existing approaches to deep search training lack high-quality training trajectories, prohibitive computational costs and lack of high-fidelity training data. |
| Approach: | They propose a framework that synthesizes high-quality training data by simulating real user interactions in live web search environments. |
| Outcome: | The proposed framework synthesizes high-quality training data by simulating user interactions in live web search environments. |
MTRouter: Cost-Aware Multi-Turn LLM Routing with History–Model Joint Embeddings (2026.acl-long)
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| Challenge: | Multi-turn, long-horizon tasks require dozens of sequential model calls per episode. |
| Approach: | They propose a cost-aware multi-turn LLM routing tool which encodes interaction history and candidate models into joint history–model embeddings and learns an outcome estimator from logged trajectories to predict turn-level model utility. |
| Outcome: | The proposed model reduces cost and performance by 58.7% on ScienceWorld and on Humanity’s Last Exam (HLE) and even reduces costs for held-out tasks. |
Scaling Behaviors of LLM Reinforcement Learning Post-Training: An Empirical Study in Mathematical Reasoning (2026.acl-long)
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Zelin Tan, Hejia Geng, Xiaohang Yu, Mulei Zhang, Guancheng Wan, Yifan Zhou, Qiang He, Xiangyuan Xue, Heng Zhou, Yutao Fan, Zhong-Zhi Li, Zaibin Zhang, Guibin Zhang, Chen Zhang, Zhenfei Yin, Philip Torr, Lei Bai
| Challenge: | elucidating scaling laws for large language models (LLMs) during pre-training remains unexplored. |
| Approach: | They characterize how model scale, data, and compute interact during pre-training . they find that large models consistently demonstrate superior compute and data efficiency . |
| Outcome: | The proposed scaling laws offer practical guidance for scaling reasoning capabilities through reinforcement learning post-training. |
Self-attention-based Graph-of-Thought for Math Problem Solving (2025.findings-acl)
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| Challenge: | Existing methods for generating reasoning paths in a chain structure are inefficient and non-human-like. |
| Approach: | They propose a decoding method for a chain-based LLM that constructs a thought graph simultaneously as an LLM inference and generates reasoning steps with a graph-structured self-attention mechanism. |
| Outcome: | The proposed method improves reasoning accuracy without huge computational over-expensive LLMs and avoids performance degradation issues when the LLM is too small to comprehend complex prompts. |
Online Iterative Self-Alignment for Radiology Report Generation (2025.acl-long)
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| Challenge: | Existing methods for RRG rely on supervised fine-tuning based on data pairs of radiological images and corresponding radiologist-annotated reports. |
| Approach: | They propose a method that performs supervised fine-tuning on data pairs of radiological images and corresponding radiologist-annotated reports. |
| Outcome: | The proposed method surpasses existing methods and achieves state-of-the-art performance across multiple evaluation metrics. |
DeepPrune: Parallel Scaling without Inter-trace Redundancy (2026.findings-acl)
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| Challenge: | Parallel scaling is a powerful paradigm to enhance reasoning capabilities in large language models. |
| Approach: | They propose a framework that enables efficient parallel scaling through dynamic pruning. |
| Outcome: | The proposed framework achieves token reductions of 65.73% to 88.50% compared to consensus sampling while maintaining competitive accuracy within 3.4 percentage points. |