Papers by Yefeng Zheng
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| Challenge: | a cross-domain text-to-SQL task aims to parse user questions into SQL on complete unseen databases . a single-domain task evaluates the performance on identical databases based on the same domain . |
| Approach: | They propose a cross-domain text-to-SQL task that parses user questions into SQL on unseen databases. |
| Outcome: | The proposed system can parse user questions into SQL on complete unseen databases. |
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| Challenge: | Retrieval-Augmented Generation (RAG) provides access to external knowledge, but current research focuses on retrieval quality and 'integration bottleneck' . |
| Approach: | They propose a framework that explicitly decouples reasoning from evidence integration by generating an 'Inner-Answer' and a 'Refer-Aswer" they propose 'a joint decoding mechanism that dynamically fuses the logical coherence of the Inner-Andswer with the factual precision of the Refer-Adswer at the token level' |
| Outcome: | The proposed framework improves accuracy by 12.1% and reduces hallucinations by 16.3% on five QA benchmarks. |
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| Challenge: | Existing knowledge editing approaches struggle with sequential editing scenarios and harm the general capabilities of the model. |
| Approach: | They propose a framework that combines robust supervised fine-tuning and model merging for knowledge editing to combine supervised and supervised learning. |
| Outcome: | The proposed approach outperforms existing methods in sequential editing while preserving the original performance of the model. |
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| Challenge: | a new study examines the bias of disease prediction in large language models . the model biases are prevalent across gender, age range and disease judgment behaviors . |
| Approach: | They propose a prompt-based approach to alleviate the bias in disease prediction with LLMs. |
| Outcome: | The proposed model alleviates the observed bias in disease prediction with LLMs. |
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| Challenge: | Hallucination is a critical challenge for large language models and large vision-language models (LVLMs) however, dedicated research on medical hallucinations remains unexplored. |
| Approach: | They provide a unified perspective on medical hallucination for both LLMs and LVLMs, and delve into its causes. |
| Outcome: | The proposed models have demonstrated impressive performance on a variety of medical benchmarks. |
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| Challenge: | Traditional classification, contrastive learning, and large language models fail to detect subtle clues necessary for differentiation. |
| Approach: | They propose a framework that leverages Large Language Models to achieve accurate disease diagnosis . they structure patient information and integrate extensive medical knowledge to guide the analysis . |
| Outcome: | The proposed framework aims to identify subtle differences between similar diseases . the proposed framework can be used in clinical practice to improve accuracy . |
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| Challenge: | Existing QG systems perform substantially worse in answering multi-hop questions than single-hop ones. |
| Approach: | They propose a framework that progressively increases question difficulty through step-by-step rewriting under the guidance of an extracted reasoning chain. |
| Outcome: | The proposed framework increases question difficulty through step-by-step rewriting under the guidance of an extracted reasoning chain. |
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| Challenge: | Existing effectiveness prediction methods focus on one specific medicine, one specific disease, or one specific lab test, making it hard to extend to general medicines and diseases in hospital/ICU scenarios. |
| Approach: | They propose to use knowledge enhanced module to incorporate external knowledge about medications and a medical feature learning module to determine the interaction between diagnosis and medications. |
| Outcome: | The proposed model outperforms state-of-the-art methods on a public dataset showing that it significantly outperformed existing models. |
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| Challenge: | Current approaches focus on isolated meme analysis, either for harmful content detection or standalone interpretation, overlooking a fundamental challenge: the same meme can express different intents depending on its conversational context. |
| Approach: | They propose a benchmark to evaluate how large vision language models understand memes in their original context. |
| Outcome: | The proposed benchmark evaluates how large vision language models understand meme intent in their original context. |
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| Challenge: | Medical Information Extraction (MIE) tasks are a fundamental component of medical NLP. |
| Approach: | They propose an alternative adaptive constraint strategy to adjust the scale and scope of contrastive tokens. |
| Outcome: | The proposed approach selectively enhances the identification and classification capabilities while minimizing the influence of other inherent abilities in LLMs. |
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| Challenge: | Existing methods for document hashing combine only one of semantics and neighborhood information, lacking a theoretical principle to guide the integration process. |
| Approach: | They propose to encode neighborhood information with a graph-induced Gaussian distribution and integrate it with generative models. |
| Outcome: | The proposed model can be trained as efficiently as state-of-the-art methods on benchmark datasets. |
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| Challenge: | Knowledge graphs (KGs) are increasingly important in various applications such as question answering and search engines. |
| Approach: | They propose to use a supervised learning environment with unbiased seed mappings for training and validation to evaluate alignment methods in an industrial context. |
| Outcome: | The proposed methods are evaluated in an industrial context and are compared with DBpedia and Wikidata benchmarks. |
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| Challenge: | Existing methods for aligning knowledge graph entities ignore the ontology which contains critical meta information such as classes and membership relationships with entities. |
| Approach: | They propose an ontology-guided method where KGs and ontologies are jointly embedded. |
| Outcome: | Extensive experiments on seven public and industrial benchmarks show the ontology-guided method performs well and is cost-effective. |
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| Challenge: | Recent methods for extracting entities and relations from unstructured texts suffer from limitations, such as redundancy of relation prediction and inefficiency. |
| Approach: | They propose a joint relational triple extraction framework based on Potential Relation and Global Correspondence (PRGC) they propose overlapping triples for relation prediction and relation-relational alignment . |
| Outcome: | The proposed framework achieves state-of-the-art performance on public benchmarks with higher efficiency and consistent performance gain on complex scenarios of overlapping triples. |
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| Challenge: | Existing research on taskoriented dialog systems mainly includes pipeline and end-to-end methods due to its non-differentiable nature. |
| Approach: | They propose a multi-level reward modeling approach that factorizes a reward into a three-level hierarchy: domain, act, and slot. |
| Outcome: | The proposed approach significantly improves performance and speed of training in a wide range of dialog systems. |
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| Challenge: | Existing methods for temporal reasoning are limited and apply a fixed pipeline to all questions. |
| Approach: | They propose an adaptive temporal reasoning method that dynamically executes reasoning steps based on context and task requirements. |
| Outcome: | Experiments on two temporal QA benchmarks show the proposed method works. |
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| Challenge: | Automated evaluation of natural language generation tasks fails to focus on medical QA because of the diversity in medical terminology. |
| Approach: | They propose a new data structure, imap, to capture key information in questions and answers. |
| Outcome: | The proposed model outperforms state-of-the-art metrics in correlation with human scores. |
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| Challenge: | Recent advances in large language models (LLMs) have catalyzed the rise of reasoningintensive inference paradigms, where models perform explicit step-by-step reasoning before generating final answers. |
| Approach: | They propose a large-small LLM collaboration framework that synergizes large and small language models to achieve high-quality reasoning with significantly reduced computational cost. |
| Outcome: | The proposed framework outperforms the mentor LLM while preserving the benefits of the thinking paradigm of LLMs. |
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| Challenge: | RareSyn is a data synthesis approach to augment and de-identify EHRs with a focus on rare diseases. |
| Approach: | They propose a data synthesis approach to augment and de-identify EHRs with a focus on rare diseases. |
| Outcome: | The proposed model augments and de-identifies EHRs with a focus on rare diseases. |
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| Challenge: | Existing research on building ES conversation systems only considered single-turn interactions with users, which is over-simplified and has limited support for multi-turn systems. |
| Approach: | They propose a multi-turn ES conversation system that uses lookahead heuristics to estimate future user feedback after using particular strategies. |
| Outcome: | The proposed system significantly outperforms baselines in both dialogue generation and strategy planning. |
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| Challenge: | X-ray and CT are the gold standard for COVID-19 diagnosis and treatment . however, due to the excessive number of patients, writing reports becomes a heavy burden for radiologists. |
| Approach: | They propose to use X-ray and CT to generate medical reports automatically . they evaluate DeltaNet on a COVID-19 dataset, where it outperforms state-of-the-art approaches . |
| Outcome: | The proposed system outperforms state-of-the-art methods on a COVID-19 dataset. |
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| Challenge: | Existing methods for multimodal sarcasm detection neglect high-order relationships and underestimate high-frequency messages. |
| Approach: | They propose a Dual Graph-based Learning Framework to capture inter-modal inconsistencies . they propose combining a hypergraph and a vanilla graph to achieve enhanced propagation . |
| Outcome: | The proposed model outperforms existing state-of-the-art methods on two benchmark datasets. |
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| Challenge: | Distant supervision models suffer from high label noise and are not reliable for DS. |
| Approach: | They propose a model-agnostic instance sampling method for relation extraction (RE) by influence function, namely REIF. |
| Outcome: | The proposed method reduces the computational complexity from O(mn) to O(1), with analyzing its robustness on the selected sampling function. |
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| Challenge: | Large Language Models (LLMs) have demonstrated exceptional capabilities across diverse natural language processing tasks. |
| Approach: | They propose a training-free method for unifying different specialized LLMs into a single model using model-wise and layer-wise pruning and scaling. |
| Outcome: | The proposed method outperforms existing merging techniques and surpasses models fine-tuned on combined datasets in most scenarios. |
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| Challenge: | Existing approaches ignore relationships between medical items and statuses in the multi-turn doctor-patient dialogue. |
| Approach: | They propose a task to extract structured medical information from free text dialogues . they propose 'Dialogue Medical Information Extraction' to model relationships between items . |
| Outcome: | The proposed model outperforms previous models and achieves state-of-the-art performance on the public benchmark data set. |
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| Challenge: | Existing unsupervised document hashing methods are mostly established on generative models . due to the difficulties of capturing long dependency structures, these methods rarely model the raw documents directly . |
| Approach: | They propose to learn hash codes from BERT embeddings by modifying existing models . they use mutual information maximization principle to maximize mutual information . |
| Outcome: | The proposed method outperforms existing methods learned from BERT embeddings on three benchmark datasets. |
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| Challenge: | Existing methods focus on graph structure learning or semantic reasoning, lacking the capability to capture the inherent differences between historical and non-historical events. |
| Approach: | They propose a temporal knowledge graph reasoning framework that integrates both structural and semantic information to guide the reasoning process for different events. |
| Outcome: | The proposed framework integrates structural and semantic information to predict future events . it can provide evidence for many downstream tasks, including situation analysis and political decision making . |
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| Challenge: | Existing efficient test-time scaling methods introduce budget constraints or early stop mechanisms to avoid overthinking for straightforward questions but add human bias to the reasoning process. |
| Approach: | They propose a framework that dynamically adapts reasoning depth based on question complexity. |
| Outcome: | Experimental results show that the proposed framework achieves higher accuracy than baseline methods and reduces computational overhead by up to 25.2%. |
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| Challenge: | Automated diagnosis (AD) is a critical application of AI in healthcare . despite its simplicity and superior performance, a decline in disease diagnosis accuracy is observed . |
| Approach: | They propose a new collaborative disease and symptom generation framework to improve automatic diagnosis. |
| Outcome: | The Transformer-based method achieves an average 2.3% improvement over previous state-of-the-art methods . it can be used to query patients about their symptoms and health concerns . |
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| Challenge: | Existing methods to explore semantics of knowledge graphs have been proposed to explore these semantics in distinct ways. |
| Approach: | They propose to leverage existing methods in relation-aware manner to learn an ensemble by leveraging existing methods. |
| Outcome: | The proposed method has the same computation cost as general ensemble methods but with much better performance on benchmark datasets. |
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| Challenge: | Existing studies focus on how to utilize information from different modalities, but it is not trivial to leverage multi-modal knowledge in entity alignment because of the modality heterogeneity. |
| Approach: | They propose a Multi-modal Contrastive Learning based Entity Alignment model which learns multiple individual representations from multiple modalities and performs contrastive learning to jointly model inter-modal and inter-modal interactions. |
| Outcome: | The proposed model outperforms state-of-the-art models on public datasets under both supervised and unsupervised conditions. |
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| Challenge: | Existing approaches focus on diagnostic reasoning based on internal model knowledge or static knowledge bases. |
| Approach: | They propose a two-stage diagnostic reasoning framework that integrates multi-perspective evidence to generate a diagnostic prediction. |
| Outcome: | The proposed method generates suspected diagnoses and reasoning traces from web search, SOAP-formatted case, and clinical case database. |
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| Challenge: | Existing attempts to apply large language models to BioEL have revealed difficulties . |
| Approach: | They propose a framework that enables large language models to adapt well to BioEL . they employ restrictive decoding to ensure the generation of valid entities . |
| Outcome: | Extensive experiments show that the framework outperforms existing LLMs. |
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| Challenge: | Existing methods for relation classification suffer from the scarcity of manually annotated data. |
| Approach: | They propose a novel relation classification model that incorporates query representation into the encoding of novel prototypes and utilizes iteratively to achieve more interaction. |
| Outcome: | The proposed model outperforms the state-of-the-art model on two benchmark datasets. |
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| Challenge: | Jailbreak attacks craft specific prompts or append adversarial suffixes to prompts, thereby inducing language models to generate harmful or unethical content and bypassing the model’s safety guardrails. |
| Approach: | They propose a Monte Carlo Tree Search (MCTS) based Prompt Auto-generation (MPA) method to generate adversarial suffixes for valid jailbreak attacks. |
| Outcome: | The proposed method outperforms existing methods on open-source and closed-source models and shows that it can generate harmful responses. |
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| Challenge: | Dialogue policy learning (DPL) aims to determine an abstract representation (also known as action) to guide what the response should be. |
| Approach: | They propose a joint Transformer-based model that generates a token-grained policy that allows more dynamic dialogue action generation without the need for predefined action candidates. |
| Outcome: | The proposed model outperforms existing models showing improvements of 9% and 13% in success rate and 34% and 37% in diversity of dialogue actions across two benchmark dialogue modeling tasks. |
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| Challenge: | Recent models for visual question localized-answering (VQLA) lack the ability to relate these answers to their localization at an instance level. |
| Approach: | They propose a model which introduces optimal transport to achieve bidirectional and fine-grained alignment between images and questions, enabling more precise localization. |
| Outcome: | The proposed model outperforms state-of-the-art models on two widely-used datasets on surgical scenes and surgical instruments. |
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| Challenge: | Existing preference-based methods for medical large vision-Language Models face limitations in medical settings . existing methods are limited by overfitting to superficial cues and pseudo convergence of the preference signal. |
| Approach: | They propose a framework that enables evidence-aware and adaptive preference learning for Med-LVLMs. |
| Outcome: | The proposed framework improves evidence-aware and adaptive preference learning for Med-LVLMs. |
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| Challenge: | Existing methods for biomedical entity linking are discriminative and disambiguative . Existing models for bioMEDical entity linking use a BERT-based encoder to encode mentions and entities into the same embedding space and dissociate mentions by nearest neighbors. |
| Approach: | They propose a model that treats biomedical entity linking as Multiple Choice Question Answering. |
| Outcome: | The proposed model outperforms state-of-the-art models on several datasets. |
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| Challenge: | Existing single-cell foundation language models are based on pre-trained and large language models. |
| Approach: | They review the development of single-cell foundation language models . they discuss data tokenization strategies and pre-training paradigms . |
| Outcome: | The proposed models have shown remarkable performance in a variety of single-cell data analysis tasks. |
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| Challenge: | Pre-trained models perform poorly with limited data and rare biomedical words. |
| Approach: | They propose to use prompt to fine-tune pre-trained models for biomedical domain tuning with a simple approach. |
| Outcome: | The proposed method achieves up to 6% improvement in biomedical natural language inference task without any extra parameters or training steps using few-shot vanilla prompt settings. |
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| Challenge: | Knowledge graph completion (KGC) is a widely used method to tackle incompleteness in knowledge graphs (KGs). |
| Approach: | They propose a general framework to compensate for the deficiency of contextualized knowledge by querying large language models from various perspectives. |
| Outcome: | The proposed framework improves knowledge graph completion (KGC) by querying large language models from various perspectives. |
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| Challenge: | Existing approaches to disease classification are limited in real-world clinics due to insufficient data and inflexibility. |
| Approach: | They propose a medical knowledge-Enhanced Contrastive Learning approach to disease diagnosis . they incorporate medical knowledge graphs and medical licensing exams in modeling . |
| Outcome: | The proposed model outperforms existing models on real clinical EMRs on a single patient. |