Papers by Junfeng Fang
TC–RAG: Turing–Complete RAG’s Case study on Medical LLM Systems (2025.acl-long)
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Xinke Jiang, Yue Fang, Rihong Qiu, Haoyu Zhang, Yongxin Xu, Hao Chen, Wentao Zhang, Ruizhe Zhang, Yuchen Fang, Xinyu Ma, Xu Chu, Junfeng Zhao, Yasha Wang
| Challenge: | Existing approaches to RAG neglect system state variables, resulting in poor performance and erroneous knowledge accumulation. |
| Approach: | They propose a framework that incorporates a Turing Complete System to manage state variables and manage retrieval halting. |
| Outcome: | The proposed framework improves on seven real-world healthcare datasets and shows that it is more accurate than existing methods. |
Context-DPO: Aligning Language Models for Context-Faithfulness (2025.findings-acl)
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Baolong Bi, Shaohan Huang, Yiwei Wang, Tianchi Yang, Zihan Zhang, Haizhen Huang, Lingrui Mei, Junfeng Fang, Zehao Li, Furu Wei, Weiwei Deng, Feng Sun, Qi Zhang, Shenghua Liu
| Challenge: | Context-DPO is the first alignment method specifically designed to enhance contextfaithfulness for large language models. |
| Approach: | They propose a benchmark that simulates Retrieval-Augmented Generation scenarios with knowledge conflicts to evaluate context-faithfulness. |
| Outcome: | The proposed method improves LLMs' context-faithfulness by 35% to 280% over open-source models. |
Decoding by Contrasting Knowledge: Enhancing Large Language Model Confidence on Edited Facts (2025.acl-long)
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| Challenge: | In-context knowledge editing (ICE) is currently the most effective method for knowledge editing, but it is constrained by the black-box modeling of LLMs and lacks interpretability. |
| Approach: | They propose a method to decode new knowledge by comparing logits with unedited knowledge to improve the accuracy of LLMs. |
| Outcome: | The proposed method improves the performance of LLaMA3-8B-instruct on MQuAKE by up to 219%. |
3DS: Medical Domain Adaptation of LLMs via Decomposed Difficulty-based Data Selection (2025.emnlp-main)
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Hongxin Ding, Yue Fang, Runchuan Zhu, Xinke Jiang, Jinyang Zhang, Yongxin Xu, Weibin Liao, Xu Chu, Junfeng Zhao, Yasha Wang
| Challenge: | Effective domain adaptation typically involves supervised fine-tuning on carefully selected instruction-tuned data. |
| Approach: | They propose a model-centric data selection framework that aligns data selection with the model’s knowledge distribution to improve model performance. |
| Outcome: | The proposed framework outperforms existing methods by up to 2.97% accuracy in the healthcare domain. |
HyKGE: A Hypothesis Knowledge Graph Enhanced RAG Framework for Accurate and Reliable Medical LLMs Responses (2025.acl-long)
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Xinke Jiang, Ruizhe Zhang, Yongxin Xu, Rihong Qiu, Yue Fang, Zhiyuan Wang, Jinyi Tang, Hongxin Ding, Xu Chu, Junfeng Zhao, Yasha Wang
| Challenge: | Recent approaches suffer from insufficient and repetitive knowledge retrieval, tedious and time-consuming query parsing, and monotonous knowledge utilization. |
| Approach: | They propose a retrieval-augmented generation framework which leverages LLMs’ powerful reasoning capacity to compensate for the incompleteness of user queries. |
| Outcome: | The proposed framework improves the accuracy and reliability of Large Language Models (LLMs) by combining the rich knowledge of LLMs with Hypothesis Outputs. |
MolTC: Towards Molecular Relational Modeling In Language Models (2024.findings-acl)
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Junfeng Fang, Shuai Zhang, Chang Wu, Zhengyi Yang, Zhiyuan Liu, Sihang Li, Kun Wang, Wenjie Du, Xiang Wang
| Challenge: | Molecular Relational Learning (MRL) is a promising way to understand interactions between molecular pairs. |
| Approach: | They propose a novel LLM-based multi-modal framework for molecular interaction modeling following Chain-of-Thought (CoT) theory which integrates graphical information of two molecules in pair. |
| Outcome: | The proposed framework integrates graphical information of two molecules in pair. |
Forget the Token and Pixel: Rethinking Gradient Ascent for Concept Unlearning in Multimodal Generative Models (2025.findings-acl)
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Jiaqi Li, Chuanyi Zhang, Miaozeng Du, Hui Zhang, Yongrui Chen, Qianshan Wei, Junfeng Fang, Ruipeng Wang, Sheng Bi, Guilin Qi
| Challenge: | Gradient Ascent (GA) has emerged as a promising approach for concept unlearning in Multimodal Generative Models (MGMs). |
| Approach: | They propose a novel approach that selectively applies GA to targeted Conceptual Knowledge while preserving Natural Knowledge through Gradient Descent (GD). |
| Outcome: | The proposed approach removes Conceptual Knowledge and inadvertently diminishes Natural Knowledge, resulting in utility degradation. |
Safety in Large Reasoning Models: A Survey (2025.findings-emnlp)
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Cheng Wang, Yue Liu, Baolong Bi, Duzhen Zhang, Zhong-Zhi Li, Yingwei Ma, Yufei He, Shengju Yu, Xinfeng Li, Junfeng Fang, Jiaheng Zhang, Bryan Hooi
| Challenge: | Large Reasoning Models (LRMs) have a high level of advanced reasoning capabilities, but they are vulnerable and vulnerable. |
| Approach: | This paper presents the first comprehensive survey of Large Reasoning Models . it explores the new safety risks, attacks, and defense strategies specific to LRMs based on reasoning . |
| Outcome: | The proposed study examines the safety and security risks of large reasoning models. |
Knowledge Graph-Driven Memory Editing with Directional Interventions (2025.findings-emnlp)
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| Challenge: | Large Language Models (LLMs) are hampered by inaccuracies and outdated information. |
| Approach: | They propose a framework that constructs knowledge graphs using available information to guide the direction of knowledge editing. |
| Outcome: | The proposed framework allows consistent, aligned, and stable information during large-scale editing scenarios. |
Mitigating Hallucinations in Large Vision-Language Models without Performance Degradation (2026.acl-long)
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| Challenge: | Recent advances in large vision-language models produce hallucinations that compromise output reliability. |
| Approach: | They propose a dual-stage framework for mitigating hallucinations without performance degradation . they propose semantic-aware component disentanglement and interpretable parameter updates . |
| Outcome: | The proposed model reduces hallucinations by 23.4% while maintaining 97.4% of general generative capability. |
Cracking the Code of Hallucination in LVLMs with Vision-aware Head Divergence (2025.acl-long)
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Jinghan He, Kuan Zhu, Haiyun Guo, Junfeng Fang, Zhenglin Hua, Yuheng Jia, Ming Tang, Tat-Seng Chua, Jinqiao Wang
| Challenge: | Existing methods focus on alignment training or decoding refinements but address symptoms at the generation stage without probing the underlying causes. |
| Approach: | They propose a training-free approach to mitigate hallucination by enhancing the role of vision-aware attention heads. |
| Outcome: | The proposed method achieves superior performance compared to state-of-the-art approaches in mitigating hallucinations while maintaining high efficiency with negligible additional time overhead. |
Steering LVLMs via Sparse Autoencoder for Hallucination Mitigation (2025.findings-emnlp)
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| Challenge: | Existing approaches to address hallucinations in large vision-language models require substantial computational cost and time. |
| Approach: | They propose to leverage sparse autoencoders to identify semantic directions closely associated with faithfulness or hallucination, extracting more precise and disentangled hallucinian-related representations. |
| Outcome: | The proposed method outperforms existing decoding approaches while maintaining transferability across different model architectures with negligible additional time overhead. |
DFAMS: Dynamic-flow guided Federated Alignment based Multi-prototype Search (2026.acl-long)
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Zhibang Yang, Xinke Jiang, Rihong Qiu, Ruiqing Li, Yihang Zhang, Yue Fang, Yongxin Xu, Hongxin Ding, Xu Chu, Junfeng Zhao, Yasha Wang
| Challenge: | Existing methods for ambiguous queries struggle to retrieve high-quality documents . DFAMS outperforms advanced FR methods by 14.37% in knowledge classification accuracy . |
| Approach: | They propose a framework that leverages dynamic information flow to identify latent query intents and construct semantically aligned knowledge partitions for accurate retrieval across heterogeneous sources. |
| Outcome: | The proposed framework outperforms existing methods in classification accuracy and retrieval recall tests. |
ProMed: Shapley Information Gain Guided Reinforcement Learning for Proactive Medical LLMs (2026.acl-long)
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Hongxin Ding, Baixiang Huang, Yue Fang, Weibin Liao, Xinke Jiang, Jinyang Zhang, Yinghao Zhu, Zheng Li, Liantao Ma, Junfeng Zhao, Yasha Wang
| Challenge: | Existing medical Large Language Models (LLMs) follow a reactive paradigm, risking diagnostic errors by answering before seeking sufficient details. |
| Approach: | They propose a reinforcement learning framework that transitions LLMs toward a proactive paradigm, enabling them to ask clinically valuable questions before decision-making. |
| Outcome: | Experiments on partial-information medical benchmarks show that ProMed outperforms state-of-the-art methods by 6.29% on average and delivers a 54.45% gain over the reactive paradigm. |
Neuron-Level Sequential Editing for Large Language Models (2025.acl-long)
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Houcheng Jiang, Junfeng Fang, Tianyu Zhang, Baolong Bi, An Zhang, Ruipeng Wang, Tao Liang, Xiang Wang
| Challenge: | Existing model editing methods focus on single-round editing and often face significant challenges in sequential model editing. |
| Approach: | They propose a model editing method that optimizes the target layer’s hidden states using the model’s original weights to prevent model failure. |
| Outcome: | The proposed method outperforms existing model editing methods and is available on the open-source platform 4open.science. |