Papers by Louis Blankemeier
GREEN: Generative Radiology Report Evaluation and Error Notation (2024.findings-emnlp)
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Sophie Ostmeier, Justin Xu, Zhihong Chen, Maya Varma, Louis Blankemeier, Christian Bluethgen, Arne Md, Michael Moseley, Curtis Langlotz, Akshay Chaudhari, Jean-Benoit Delbrouck
| Challenge: | Existing automated evaluation metrics fail to consider factual correctness or are limited in their interpretability. |
| Approach: | They propose a radiology report evaluation metric that leverages natural language understanding of language models to identify and explain clinically significant errors. |
| Outcome: | The proposed method demonstrates higher correlation with expert error counts and higher alignment with expert preferences when compared to previous methods. |
RadGraph-XL: A Large-Scale Expert-Annotated Dataset for Entity and Relation Extraction from Radiology Reports (2024.findings-acl)
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Jean-Benoit Delbrouck, Pierre Chambon, Zhihong Chen, Maya Varma, Andrew Johnston, Louis Blankemeier, Dave Van Veen, Tan Bui, Steven Truong, Curtis Langlotz
| Challenge: | RadGraph-XL is an expert-annotated dataset for structured clinical data extraction. |
| Approach: | They propose a large-scale, expert-annotated dataset for clinical entity and relation extraction using radiology reports. |
| Outcome: | The proposed model outperforms existing methods by up to 52% and outperfies GPT-4 in this domain. |
Efficient Diagnosis Assignment Using Unstructured Clinical Notes (2023.acl-short)
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| Challenge: | Electronic phenotyping entails using electronic health records (EHRs) to identify patients with specific clinical outcomes and determine when those outcomes occurred. |
| Approach: | They propose a framework for electronic phenotyping that integrates labeling functions and a disease-agnostic neural network to assign diagnoses to patients. |
| Outcome: | The proposed framework disambiguates hypertension true positives and false positives with a supervised area under the precision-recall curve (AUPRC) of 0.85. |