Papers by Wenjie Fu
MulDimIF: A Multi-Dimensional Constraint Framework for Evaluating and Improving Instruction Following in Large Language Models (2026.findings-acl)
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Junjie Ye, Caishuang Huang, Zhuohan Chen, Wenjie Fu, Chenyuan Yang, Leyi Yang, Yilong Wu, Peng Wang, Meng Zhou, Xiaolong Yang, Tao Gui, Qi Zhang, Zhongchao Shi, Jianping Fan, Xuanjing Huang
| Challenge: | Existing research has focused on constraint categories, offering little guidance for improving instruction following abilities. |
| Approach: | They propose a multi-dimensional constraint framework that allows for instruction following . they construct 9,106 code-verifiable samples and evaluate 18 LLMs . |
| Outcome: | The proposed framework improves instruction following performance without compromising general performance. |
Interleaved Tool-Call Reasoning for Protein Function Understanding (2026.acl-long)
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| Challenge: | Recent advances in large language models have highlighted the effectiveness of chain-of-thought reasoning in symbolic domains such as mathematics and programming. |
| Approach: | They propose a tool-augmented protein reasoning agent that unifies problem decomposition, tool invocation, and grounded answer generation. |
| Outcome: | The proposed protein function understanding agent outperforms text-only reasoning models with an average performance improvement of 103%. |
Effective Unsupervised Constrained Text Generation based on Perturbed Masking (2022.findings-acl)
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| Challenge: | Existing methods for constrained text generation stochastically sample edit positions and actions, which cause unnecessary search steps. |
| Approach: | They propose to extend perturbed masking technique to search for most incongruent token to edit and introduce four multi-aspect scoring functions to select edit action to further reduce search difficulty. |
| Outcome: | The proposed method achieves state-of-the-art in two representative tasks . it does not require supervised data, so it could be applied to different generation tasks. |
E-Verify: A Paradigm Shift to Scalable Embedding-based Factuality Verification (2025.findings-emnlp)
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| Challenge: | Existing factuality verification methods follow a Decompose-Then-Verify paradigm, which improves granularity but suffers from poor scalability and efficiency. |
| Approach: | They propose a Decompose-Embed-Interact paradigm that shifts factuality verification from costly text-level reasoning to efficient alignment in embedding space. |
| Outcome: | The proposed paradigm shifts factuality verification from costly text-level reasoning to efficient alignment in embedding space . |
MMAPG: A Training-Free Framework for Multimodal Multi-hop Question Answering via Adaptive Planning Graphs (2025.emnlp-main)
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| Challenge: | Existing multimodal question answering models rely on sequential retrieval and reasoning, but this single-path paradigm makes them vulnerable to errors due to misleading intermediate steps. |
| Approach: | They propose a multimodal multi-hop question answering framework guided by an Adaptive Planning Graph . they propose modality-specific strategies that dynamically adapt to distinct data types . |
| Outcome: | The proposed framework outperforms existing models that rely on training. |
CI-Work: Benchmarking Contextual Integrity in Enterprise LLM Agents (2026.acl-industry)
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Wenjie Fu, Xiaoting Qin, Jue Zhang, Qingwei Lin, Lukas Wutschitz, Robert Sim, Saravan Rajmohan, Dongmei Zhang
| Challenge: | Enterprise LLM agents can dramatically improve workplace productivity, but their core capability, retrieving and using internal context to act on a user’s behalf, also creates new risks for sensitive information leakage. |
| Approach: | They propose a Contextual Integrity-grounded benchmark that simulates enterprise workflows across five information-flow directions and evaluates whether agents can convey *essential* content while withholding *sensitive* context in dense retrieval settings. |
| Outcome: | The proposed model demonstrates that privacy failures are prevalent in enterprise workflows and that higher task utility correlates with increased privacy violations. |
AgencyBench: Benchmarking the Frontiers of Autonomous Agents in 1M-Token Real-World Contexts (2026.acl-long)
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Keyu Li, Junhao Shi, Yang Xiao, Mohan Jiang, Jie Sun, Yunze Wu, Dayuan Fu, Shijie Xia, Xiaojie Cai, Tianze Xu, Weiye Si, Wenjie Li, Dequan Wang, Pengfei Liu
| Challenge: | Existing benchmarks focus on single agentic capability, failing to capture long-horizon real-world scenarios. |
| Approach: | They propose a benchmark that evaluates 6 agentic capabilities across 32 real-world scenarios. |
| Outcome: | Experiments show that closed-source models outperform open-source model (48.4% vs 32.1%) integrating models with advanced scaffolds to form autonomous agents is a paradigm shift. |