Papers by Jianan Zhao
ProtLLM: An Interleaved Protein-Language LLM with Protein-as-Word Pre-Training (2024.acl-long)
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Le Zhuo, Zewen Chi, Minghao Xu, Heyan Huang, Jianan Zhao, Heqi Zheng, Conghui He, Xian-Ling Mao, Wentao Zhang
| Challenge: | Experimental results demonstrate that ProtLLM achieves superior performance against protein-specialized baselines on protein-centric tasks and induces zero-shot and in-context learning capabilities on protein language tasks. |
| Approach: | They propose a cross-modal large language model (LLM) that can handle protein-centric and protein-language tasks by using a dynamic protein mounting mechanism. |
| Outcome: | The proposed model can predict proteins from a vast pool of candidates and can also predict natural language and biological papers. |
To Copy Rather Than Memorize: A Vertical Learning Paradigm for Knowledge Graph Completion (2023.acl-long)
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Rui Li, Xu Chen, Chaozhuo Li, Yanming Shen, Jianan Zhao, Yujing Wang, Weihao Han, Hao Sun, Weiwei Deng, Qi Zhang, Xing Xie
| Challenge: | Existing methods for embedding knowledge graphs implicitly memorize relation rules to infer missing links, but they are difficult to memorize due to the inherent deficiencies of such implicit memorization strategy. |
| Approach: | They propose a vertical learning paradigm that allows to explicitly copy target information from related factual triples for more accurate prediction. |
| Outcome: | The proposed model improves generalization ability and makes distant link prediction significantly easier. |