Papers by Hyunjae Kim
Rationale-Guided Retrieval Augmented Generation for Medical Question Answering (2025.naacl-long)
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Jiwoong Sohn, Yein Park, Chanwoong Yoon, Sihyeon Park, Hyeon Hwang, Mujeen Sung, Hyunjae Kim, Jaewoo Kang
| Challenge: | Large language models (LLMs) struggle with hallucinations and outdated knowledge. |
| Approach: | They propose a retrieval-augmented generation framework for enhancing the reliability of RAG in biomedical contexts. |
| Outcome: | The proposed framework outperforms the previous best medical RAG model by up to 5.6% across three medical question-answering benchmarks. |
Automatic Creation of Named Entity Recognition Datasets by Querying Phrase Representations (2023.acl-long)
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| Challenge: | Named entity recognition models rely on domain-specific dictionaries provided by experts . however, such dictionary sets are infeasible in many domains where they do not exist . |
| Approach: | They propose a framework that generates NER datasets with high-coverage pseudo-dictionaries . phrase retrieval models are used to retrieve popular entities rather than rare ones . |
| Outcome: | The proposed framework outperforms the previous best model by an average F1 score of 4.7 across five NER benchmark datasets. |
Benchmarking Direct Preference Optimization for Medical Large Vision–Language Models (2026.findings-eacl)
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| Challenge: | Large vision-language models (LVLMs) are gaining traction in clinical tasks such as diagnostic support, report generation, and medical question answering. |
| Approach: | They present a systematic evaluation of nine DPO variants applied to two leading medical LVLMs. |
| Outcome: | The proposed model improves alignment and reduces severe hallucinations, but yields inconsistent gains over supervised fine-tuning. |
ETHIC: Evaluating Large Language Models on Long-Context Tasks with High Information Coverage (2025.naacl-long)
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| Challenge: | Existing evaluation methods do not assess whether large language models fully utilize contextual information. |
| Approach: | They introduce a new metric to assess LLMs' ability to fully utilize contextual information. |
| Outcome: | The proposed benchmark comprises 1,986 test instances spanning four long-context tasks with high IC scores in the domains of books, debates, medicine, and law. |
Ranking Paragraphs for Improving Answer Recall in Open-Domain Question Answering (D18-1)
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| Challenge: | Recent work has combined open-domain question answering with machine comprehension models to find answers in a large knowledge source. |
| Approach: | They propose a machine comprehension model that ranks paragraphs of retrieved documents for a higher answer recall with less noise. |
| Outcome: | The proposed model improves on four open-domain QA datasets by 7.8% on average. |
MED-COREASONER: Reducing Language Disparities in Medical Reasoning via Language-Informed Co-Reasoning (2026.acl-long)
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Fan Gao, Sherry T. Tong, Jiwoong Sohn, Jiahao Huang, Junfeng Jiang, Ding Xia, Piyalitt Ittichaiwong, Kanyakorn Veerakanjana, Hyunjae Kim, Qingyu Chen, Edison Marrese-Taylor, Kazuma Kobayashi, Akiko Aizawa, Irene Li
| Challenge: | Existing models that use English and local languages have a multilingual gap . a language-informed co-reasoning framework can be used to improve multilingual reasoning . |
| Approach: | They propose a language-informed co-reasoning framework that elicits parallel English and local-language reasoning and abstracts them into structured concepts. |
| Outcome: | Experiments show that Med-CoReasoner improves multilingual reasoning performance by 5% . the framework produces clinically sound and culturally grounded reasoning traces . |
Learn to Resolve Conversational Dependency: A Consistency Training Framework for Conversational Question Answering (2021.acl-long)
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| Challenge: | Existing approaches do not explicitly train QA models on how to resolve conversational dependency, and thus these models are limited in understanding human dialogues. |
| Approach: | They propose a framework that generates self-contained questions that can be understood without the conversation history and then trains a QA model with the pairs of original and self-constructed questions using a consistency-based regularizer. |
| Outcome: | The proposed framework improves the models’ performance by up to 1.2 F1 on QuAC, and 5.2 F1 for CANARD, while addressing the limitations of the existing approaches. |
Learning from Negative Samples in Biomedical Generative Entity Linking (2025.findings-acl)
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| Challenge: | Generative models are usually trained only with positive samples and do not explicitly learn from hard negative samples, which are entities that look similar but have different meanings. |
| Approach: | They propose a framework that trains generative BioEL models using negative samples to learn from hard negative samples. |
| Outcome: | The proposed framework outperforms baseline models by up to an average top-1 accuracy of 1.4% on five benchmarks. |
CookingSense: A Culinary Knowledgebase with Multidisciplinary Assertions (2024.lrec-main)
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| Challenge: | CookingSense is a descriptive collection of knowledge assertions in the culinary domain extracted from various sources, including web data, scientific papers, and recipes. |
| Approach: | They introduce CookingSense, a descriptive collection of knowledge assertions in the culinary domain extracted from various sources, including web data, scientific papers, and recipes. |
| Outcome: | The proposed system improves retrieval augmented language models and food decision support systems. |
Simple Questions Generate Named Entity Recognition Datasets (2022.emnlp-main)
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| Challenge: | Recent named entity recognition models rely on human-annotated datasets . however, in-domain dictionaries and sentences are often unavailable or expensive to construct for many entity types. |
| Approach: | They propose an ask-to-generate approach which automatically generates NER datasets by asking natural language questions to an open-domain question answering system. |
| Outcome: | The proposed model outperforms the previous best model by 19.5 F1 score on six benchmarks and achieves state-of-the-art performance. |
Fine-tuning CLIP Text Encoders with Two-step Paraphrasing (2024.findings-eacl)
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| Challenge: | Contrastive language-image pre-training models have demonstrated considerable success across various vision-language tasks, such as text-to-image retrieval. |
| Approach: | They propose a fine-tuning approach to enhance the representations of CLIP models for paraphrases by leveraging large language models. |
| Outcome: | The proposed model improves on baseline models across paraphrased retrieval, visual genome relation and attribution, and seven semantic textual similarity tasks. |
“Killing Me” Is Not a Spoiler: Spoiler Detection Model using Graph Neural Networks with Dependency Relation-Aware Attention Mechanism (2021.eacl-main)
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| Challenge: | Several attention-based spoiler detection models are insufficient for utilizing dependency relations between context words. |
| Approach: | They propose a new spoiler detection model called SDGNN that uses syntax-aware graph neural networks to detect dependency relations between context words. |
| Outcome: | The proposed model outperforms existing models on two real-world benchmark datasets. |
Med-PRM: Medical Reasoning Models with Stepwise, Guideline-verified Process Rewards (2025.emnlp-main)
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Jaehoon Yun, Jiwoong Sohn, Jungwoo Park, Hyunjae Kim, Xiangru Tang, Daniel Shao, Yong Hoe Koo, Ko Minhyeok, Qingyu Chen, Mark Gerstein, Michael Moor, Jaewoo Kang
| Challenge: | Large language models have shown promise in clinical decision making, but current approaches struggle to localize and correct reasoning errors at specific steps of the reasoning process. |
| Approach: | They propose a process reward modeling framework that leverages retrieval-augmented generation to verify each reasoning step against established medical knowledge bases. |
| Outcome: | The proposed model improves on five medical QA benchmarks and two open-ended diagnostic tasks by 13.50% on MedQA. |
Look at the First Sentence: Position Bias in Question Answering (2020.emnlp-main)
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| Challenge: | Extractive question answering models are trained to predict start and end positions of answers . recent QA models outperform humans in some datasets due to their simplicity and effectiveness. |
| Approach: | They propose to use prior distribution of answer positions as a bias model to reduce position bias. |
| Outcome: | The proposed model outperforms BERT from 37.48% to 81.64% when trained on a biased SQUAD dataset. |