Papers with BioRED

4 papers
Entangled Relations: Leveraging NLI and Meta-analysis to Enhance Biomedical Relation Extraction (2025.naacl-long)

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Challenge: Recent research has explored the potential of leveraging natural language inference (NLI) techniques to enhance relation extraction (RE).
Approach: They propose a method that verbalizes relation classes into class-indicative hypotheses to align a traditionally multi-class classification task to one of textual entailment.
Outcome: The proposed method improves relation extraction performance on BioRED and ReTACRED.
Continual Contrastive Finetuning Improves Low-Resource Relation Extraction (2023.acl-long)

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Challenge: Relation extraction (RE) has been challenging in low-resource domains and with limited resources.
Approach: They propose to pretrain and finetune the RE model using consistent objectives of contrastive learning.
Outcome: The proposed method outperforms PLM-based RE classifier on two document-level RE datasets.
Enhanced Reasoning for Biomedical Document-Level Relation Extraction via a Novel Cascade Language Model Framework (2026.acl-long)

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Challenge: Pre-trained language models (PLMs) are the leading paradigm in document-level relation extraction.
Approach: They propose a cascade framework that leverages the complementary strengths of PLMs and LLMs through a detect-then-rethink paradigm.
Outcome: The proposed framework improves on BioRED and CDR datasets and improves existing models.
Refining and Reusing Annotation Guidelines for LLM Annotation (2026.acl-long)

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Challenge: Large Language Models (LLMs) demonstrates remarkable zero-shot annotation tasks . but, they struggle with the specialized conventions of gold-standard benchmarks .
Approach: They propose to reuse and refine annotation guidelines as an alignment mechanism . they propose to use iterative moderation framework to simulate early phases of annotation projects .
Outcome: The proposed framework shows a good potential in effectively refining guidelines, but there is room for improvement.

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