Papers by Yifei Shen
Patient-Similarity Cohort Reasoning in Clinical Text-to-SQL (2026.eacl-long)
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| Challenge: | Despite recent advances, performance remains far from clinically reliable . specialized medical terminology and fine-grained temporal reasoning are key to executing clinical data analysis. |
| Approach: | They propose a benchmark for clinical text-to-SQL that demands multi-table joins, clinically meaningful filters, and executable SQL. |
| Outcome: | The proposed benchmark performs well on a set of 20 proprietary and open-source models . it scores 74.7% execution, while DeepSeek-R1 leads open-sourced at 69.2% . |
SLOT: Structuring the Output of Large Language Models (2025.emnlp-industry)
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| Challenge: | Structured outputs are essential for large language models (LLMs) but often deviate from predefined schemas hampering reliable application development. |
| Approach: | They propose a model-agnostic approach that transforms unstructured LLM outputs into precise structured formats. |
| Outcome: | The proposed model-agnostic approach transforms unstructured LLM outputs into precise structured formats. |
IPR: Intelligent Prompt Routing with User-Controlled Quality-Cost Trade-offs (2025.emnlp-industry)
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Aosong Feng, Balasubramaniam Srinivasan, Yun Zhou, Zhichao Xu, Kang Zhou, Sheng Guan, Yueyan Chen, Xian Wu, Ninad Kulkarni, Yi Zhang, Zhengyuan Shen, Dmitriy Bespalov, Soumya Smruti Mishra, Yifei Teng, Darren Yow-Bang Wang, Haibo Ding, Lin Lee Cheong
| Challenge: | Existing systems require users to manually select models or employ rigid routing rules that fail to capture the continuous spectrum of query complexity. |
| Approach: | They propose a quality-constrained intelligent prompt routing framework that automatically selects optimal models based on predicted response quality and user-specified tolerance levels. |
| Outcome: | The proposed framework achieves 43.9% cost reduction while maintaining quality parity with strongest model in the Claude family and processes requests with sub-150ms latency. |
Experience Retrieval-Augmentation with Electronic Health Records Enables Accurate Discharge QA (2026.acl-long)
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| Challenge: | Existing methods to improve the reliability of Large Language Models (LLMs) in clinical applications require factual knowledge from open-ended datasets and clinical case-based knowledge to provide context grounded in real-world patient experiences. |
| Approach: | They propose a retrieval-augmented generation framework based on the electronic health record to offer contextual information from other patients’ discharge reports. |
| Outcome: | The proposed framework outperforms a text-based ranker in a clinical QA dataset with 1,280 discharge-related questions . |
SciVer: Evaluating Foundation Models for Multimodal Scientific Claim Verification (2025.acl-long)
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| Challenge: | Existing scientific claim verification benchmarks focus on textual content alone or on verifying claims based on a single table. |
| Approach: | They propose to use SciVer to evaluate the ability of foundation models to verify claims within a multimodal scientific context. |
| Outcome: | The proposed model outperforms 21 state-of-the-art models and human experts on SciVer. |
LoRASC: Expressive and Generalizable Low-rank Adaptation for Large Models via Slow Cascaded Learning (2024.findings-emnlp)
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| Challenge: | Existing low-rank adaptations have limited expressiveness, a tendency to overfit, and sensitivity to hyperparameter settings. |
| Approach: | They propose a technique to enhance LoRA’s expressiveness and generalization capabilities while preserving its training efficiency. |
| Outcome: | The proposed method outperforms baselines, mitigates overfitting, enhances model stability, and improves OOD robustness. |
Beyond Scaling: Measuring and Predicting the Upper Bound of Knowledge Retention in Language Model Pre-Training (2026.acl-long)
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Changhao Jiang, Ming Zhang, Yifei Cao, Junjie Ye, Xiaoran Fan, Shihan Dou, Zhiheng Xi, Jiajun Sun, Yi Dong, Yujiong Shen, Jingqi Tong, Baoyu Fan, Tao Gui, Qi Zhang, Xuanjing Huang
| Challenge: | Existing methods to predict performance of large language models are lacking . authors propose a size-dependent mutual information predictor for closed-book question answering accuracy . |
| Approach: | They propose a size-dependent mutual information predictor that integrates knowledge frequency, knowledge specificity, and model size to forecast closed-book question answering accuracy. |
| Outcome: | The proposed method outperforms baseline models and achieves R2 > 0.7 in predicting QA accuracy without additional training. |