Papers by Huiqun Yu
VenusFactory: An Integrated System for Protein Engineering with Data Retrieval and Language Model Fine-Tuning (2025.acl-demo)
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Yang Tan, Chen Liu, Jingyuan Gao, Wu Banghao, Mingchen Li, Ruilin Wang, Lingrong Zhang, Huiqun Yu, Guisheng Fan, Liang Hong, Bingxin Zhou
| Challenge: | Pre-trained protein language models have been used in protein engineering, but their adoption is limited due to data collection, task benchmarking, and application challenges. |
| Approach: | They propose a versatile engine that integrates biological data retrieval, standardized task benchmarking, and modular fine-tuning of PLMs. |
| Outcome: | The proposed engine integrates biological data retrieval, task benchmarking, and modular fine-tuning of PLMs. |
ASTRA: An Automated Framework for Strategy Discovery, Retrieval, and Evolution for Jailbreaking LLMs (2026.acl-long)
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| Challenge: | Existing methods lack the capability for continuous learning and self-evolution from interactions, limiting the diversity and adaptability of attack strategies. |
| Approach: | They propose an automated framework capable of discovering, retrieving, and evolving attack strategies. |
| Outcome: | The proposed framework outperforms existing baselines in a black-box setting. |