Papers by Batuhan Nursal
Understanding LLMs’ summarization capabilities: an analysis of biomedical abstract and lay summary generation (2026.findings-acl)
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| Challenge: | Abstracts use technical language for academic audiences, while lay summaries aim to make findings accessible to non-specialists. |
| Approach: | They evaluate the performance of lightweight LLMs in generating biomedical abstracts and lay summaries in a zero-shot setting. |
| Outcome: | The proposed models perform well in generating biomedical abstracts and lay summaries in a zero-shot setting. |
BioEL: A Comprehensive Python Package for Biomedical Entity Linking (2025.findings-naacl)
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Prasanth Bathala, Christophe Ye, Batuhan Nursal, Shubham Lohiya, David Kartchner, Cassie S. Mitchell
| Challenge: | Entity Linking in biomedical literature is a critical task that enhances the extraction and integration of information from diverse scientific literature. |
| Approach: | They propose a Python package that allows for better Entity Linking in biomedical literature . the package includes four components: Ontology Object, Dataset Object and Evaluation Framework . |
| Outcome: | The proposed open-source package enables the implementation and comparison of biomedical entity linking tasks. |