GLiM: Integrating Graph Transformer and LLM for Document-Level Biomedical Relation Extraction with Incomplete Labeling (2025.findings-acl)
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Hao Fang, Yuejie Zhang, Rui Feng, Yingwen Wang, Qing Wang, Wen He, Xiaobo Zhang, Tao Zhang, Shang Gao
| Challenge: | Document-level relation extraction (DocRE) solves problems of document quality . number of entities and entity-pair relations increases, causing incomplete annotations . |
| Approach: | a framework that reduces the problem space using a graph-enhanced Transformer-based model is proposed . GLiM leverages large language models for reasoning to reduce the problem-space . |
| Outcome: | GLiM boosts average recall and F1 scores on biomedical datasets . compared with existing models, GLim outperforms existing models on biomedicine benchmarks compared to existing models . |
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